| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0076 |
|---|
| Symbol | |
|---|
| ID | 8366478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 99189 |
|---|
| End bp | 100517 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644982495 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_003140202 |
|---|
| Protein GI | 256818923 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTACGCAA TACTCGACAT AGAAACCACA GGAGGTAAAT ACAATGAAGA GGGCATTACC
GATATCGCCA TCTATCAGTT CAACGGGCAC GAAATAACCG ACCAGTTCAT ATCATTGATA
AACCCCGAAC GCCCCATTCA AGAGTTCGTT ACTAAACTCA CAGGCATCAA CAACAAAATG
TTGCGCAATG CTCCTAAATT CTATGAGGTT GCCAAACGCA TTGTCGAAAT TACCACCGAT
TGCATTATCG TAGGTCATAA TGCCGCCTTC GATTACCGCA TCTTGCAAAC TGAATTTCGC
CGCTTAGGAT ACGACTTTGT CCGTACAACG CTCTGCACCG TAGAACTATC CGAGCGACTC
ATTCCCAATA AAGAATCATA TAGTTTAGGT AAGTTAGTGC GCTCCTTAGG TATTCCTGTA
AGCGACCGGC ATCGCGCCTC TGGTGATGCC TTGGCTACCC TAAAACTCTT TAAATACCTA
CTCGAAAAGG ACACCAAAAA GGATATCATT ACTACCTCTG TCAAGCAAGA TATTCGTTTA
GAAATGGCTT CTCGTCATCT GAAAATACTC GACACTCTCC CTGAAACATT AGGGATTTTT
TATATGCATA ACGAAGAAGG TAAGGTCATT TACATCGGGA AACACAAAAA TATCAAACAA
CAAGTAAACA GGCTCTTCAC TTCTCCTTCC AAACGCGATA GATACTTGCA ACGTCATACT
TATCGAGTTA CTTATCAAGA AACAGGCAAT GAACTCATTG CTACTTTAAA AAGGTTAGAA
GAAATACACC TCAACCTCCC AAAATGTAAT AGGCGAAATC CTGAAAAAGA AATAAATATC
ACTTATGCAC TCACTTCTCA CTTTAATACT AAGGGATATC TTTGTTTTTC AATAGAATTA
TTATCCACTC AAAACGAAAT TATCACTACT TTTGAAACCA AAGAACAAGC CGAGCACTTT
TTAAATCAAA TCACTGAAGA GTACCATTTA AACGAAGTAG ATTTCAATAA CGAAACCGTA
GAGGAGTATA ACACACGCGC CTCTGAGGTA CTTTCAAAAT ACGGACTTGT GCACCGAAAC
GTAGCTATTG TAGATAAAGG TAGAGTAATA GGCGAGAAAA GCATTATTTT AGTAGTCGAT
GGCAATATTC AAGGCTATGC CTTCTTTAAT CTAAATTTCC AGCTTACTCA ATTAGAGATG
TTACAAAACC TCATCACTCC TTTACCCAAT TCATTAATAA ACCGTCACCT TTTGCACGCT
TACTTGCGTC GAAAACCCAA AGTAAAAGTG CTAAATCTAA GCGAACAAAA ACCTTATCAT
AATGAATAA
|
|---|
| Protein sequence | MYAILDIETT GGKYNEEGIT DIAIYQFNGH EITDQFISLI NPERPIQEFV TKLTGINNKM
LRNAPKFYEV AKRIVEITTD CIIVGHNAAF DYRILQTEFR RLGYDFVRTT LCTVELSERL
IPNKESYSLG KLVRSLGIPV SDRHRASGDA LATLKLFKYL LEKDTKKDII TTSVKQDIRL
EMASRHLKIL DTLPETLGIF YMHNEEGKVI YIGKHKNIKQ QVNRLFTSPS KRDRYLQRHT
YRVTYQETGN ELIATLKRLE EIHLNLPKCN RRNPEKEINI TYALTSHFNT KGYLCFSIEL
LSTQNEIITT FETKEQAEHF LNQITEEYHL NEVDFNNETV EEYNTRASEV LSKYGLVHRN
VAIVDKGRVI GEKSIILVVD GNIQGYAFFN LNFQLTQLEM LQNLITPLPN SLINRHLLHA
YLRRKPKVKV LNLSEQKPYH NE
|
|---|
| |