| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0074 |
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| Symbol | |
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| ID | 8366476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 97893 |
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| End bp | 98585 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644982493 |
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| Product | LrgB family protein |
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| Protein accession | YP_003140200 |
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| Protein GI | 256818921 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACCTT TTGTAGAAAA CGAAGCCTTC CTTTTGGCTA TTACTTTTAT CCTCTATTAT
GGCGTATTAC TTTTGCAACG CAAATATAAT TCGGTTCTTT TAAATCCCGT ATTAATCACT
GTTTTAGTGC TTATTTCTTA TCTAATAATC TTTGGCATTT CTCCTGAAAA ATACGAAGAA
GCCGGTAAGT ATATCGATTT TTGGCTCAAA CCCTCTATTG TAGCCTTAGG CGTACCTCTC
TATTTACAGC TCTCTAAGAT AAGAAAACAG CTGATACCCT TAGTGCTCTC TCAGTTTGTA
GGTAGTTTAG TAGGGGTACT TACAGTTTGT TTGGTAGCCA AATGGTTAGG GCTCGAAGAC
GATATCGCCA TTTCATTAGC CCCAAAATCA GTTACTACCC CCATTGCGTT AGAAGTATCG
CGTATGCTCA ATGGCATTGA ACCTATTACA GTAATGGCGG TAATGACCAC TGGTTTCTTA
GGGAATCTTT TTGGTATTAC CTTCCTGAAT TGGTTCCGCA TCAAAAGCCC TATGGCTAAA
GGCATTTCAT TAGGTACCGC TTCTCACGCT TTGGGTATTA TGGCGGCGTT CAACCTAAGT
GAAAAATACG CAGTATATGC TAGTTTAGGA ATGATTTTTA ACGGCATCTT TACCGCTGTA
TTAGCACCCC CAGTAGTACA TTTGCTTTTT TAA
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| Protein sequence | MKPFVENEAF LLAITFILYY GVLLLQRKYN SVLLNPVLIT VLVLISYLII FGISPEKYEE
AGKYIDFWLK PSIVALGVPL YLQLSKIRKQ LIPLVLSQFV GSLVGVLTVC LVAKWLGLED
DIAISLAPKS VTTPIALEVS RMLNGIEPIT VMAVMTTGFL GNLFGITFLN WFRIKSPMAK
GISLGTASHA LGIMAAFNLS EKYAVYASLG MIFNGIFTAV LAPPVVHLLF
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