Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0072 |
Symbol | |
ID | 8366474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 96456 |
End bp | 97421 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644982491 |
Product | hypothetical protein |
Protein accession | YP_003140198 |
Protein GI | 256818919 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAATA ATTACGACAA ACCTATTTTT ATGGACTCAG CGTCCAATGG AACAGATGGA GGGCAATCGT ATCCTTCATA TCCCAATGAT GATGACAGAC CGAGAGGTGG TGTTTTATCG AAAATTTTAA TTGCTATTTT GGCTTTGGTA GCAGGAGGCT TAGGTTATTA TACCTATTCT CTTAACAAAA ACAAAGAGGC AACGGAAGCA GATCTTAACT CTCAGAAAGA GCAAGTGCTT AAAGATTTGA ACGCTTTGAA AGGAAGCTAC GACAAAGTAG TGGACGATAA CAAAAACGTG AATCAGGATT TGCTTGATGC GCGTGACAAG ATTGGCAAGT ACATCGATTC ATTGCAGAAT ATGAAACTTA ATGTTTCGGC ATTGGCTCGT TTTAAAAACC AAGCGTTTGC TCTTGCCAAA GAGCGTGATT TCTTAATCAG AAAGAACGAC TCATTGGCAC GTGCCAACAC TGCTATCAGA AAGGATTTAG ACAGTGTGTC AGTAAAATTA GACGACACAA GTGCTAAAGC CGATTCACTT GCTCGTCAAG CCAATAGCTT AAAGAAAGTG GTAGAAGCCG GTTCTGCACT TCAAATTAGC AAACTTACAA TAGAAGCTGT AAAAGGCACT AAGAACAAAA TTACCGAAAG AGGTCGTGCA GCTGAGAAAT TAAGAGTTTG CTTTACTGTA GGAGCTAACA GAATAGCAAA ATCAGGCTCA AGATACTTCT ATGTGAAAGT AGTTTCACCA TCGGGAGTTA CCTTAGGAGC TAACGACTCT ACCTCAGAGG GAGAAAACAC AGTGAATTAT AGTACAGCTA CTCACTTCAT CTACGACAAT AAGAATGTGG ATGTGTGTGA CTTTATCAGC AGAACAGGAA AAGAGTTTGA TAAAGGCACT TATAAAGTAA CTGTTTATGA TGACCGCCTC AACGAAGTAG GTTCAGCAAA TTTATTATTG AAATAG
|
Protein sequence | MSNNYDKPIF MDSASNGTDG GQSYPSYPND DDRPRGGVLS KILIAILALV AGGLGYYTYS LNKNKEATEA DLNSQKEQVL KDLNALKGSY DKVVDDNKNV NQDLLDARDK IGKYIDSLQN MKLNVSALAR FKNQAFALAK ERDFLIRKND SLARANTAIR KDLDSVSVKL DDTSAKADSL ARQANSLKKV VEAGSALQIS KLTIEAVKGT KNKITERGRA AEKLRVCFTV GANRIAKSGS RYFYVKVVSP SGVTLGANDS TSEGENTVNY STATHFIYDN KNVDVCDFIS RTGKEFDKGT YKVTVYDDRL NEVGSANLLL K
|
| |