Gene Coch_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0045 
Symbol 
ID8366447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp60660 
End bp61232 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content31% 
IMG OID644982465 
Producthypothetical protein 
Protein accessionYP_003140172 
Protein GI256818893 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.720292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGTTA GAAATTTAGG TAATTTTTAC ATAGATGAAA ACCGAACTTT TATGGGAGGA 
CTTTGGCAGG GTATTAGCAG GCATACTTGG GAGCACCCAC AAACTTCTAT AGGTAGTGAT 
TTTAATCAAC TGATGAATAT GATAGGAGAA GTAGATAGAG TAGAGTATCT TGGTGGAGCT 
ACTTTTTCTA TTAATGAAAA AAGTGGAGAA GAAAAAGGAG TTTCTATAGG AAGCTTTATA 
AATATTGATA TTAAAGGTGA AGTAGAAGGT GATTTTACGG AATATGTGTT AACTCACCCC 
TTATTTATGC ACGAATACGG ACACTATATT GATAGCCAAA GAATGGGATT GACCTATCTA 
ATAAATGTAG GGATACCAAG TATTTTTAGT GCAATGAGTG ATGAAAAAGA AGATGGAATT 
TATAAGCATA ACTATAGATG GTATGAGATG AATGCTAATA AAAATGCTAA TAAATATTTC 
AATAAACATT ATGGAAATAG AGTAAATTGG AGTTTATATG AACCTCCTTT TGATAAATAT 
CCAACTAAAA AACCTAAAAA GAAAAAAATA TGA
 
Protein sequence
MGVRNLGNFY IDENRTFMGG LWQGISRHTW EHPQTSIGSD FNQLMNMIGE VDRVEYLGGA 
TFSINEKSGE EKGVSIGSFI NIDIKGEVEG DFTEYVLTHP LFMHEYGHYI DSQRMGLTYL 
INVGIPSIFS AMSDEKEDGI YKHNYRWYEM NANKNANKYF NKHYGNRVNW SLYEPPFDKY 
PTKKPKKKKI