Gene Coch_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0042 
Symbol 
ID8366444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp57576 
End bp58451 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content33% 
IMG OID644982462 
Producthypothetical protein 
Protein accessionYP_003140169 
Protein GI256818890 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATT ATTACAAACC TTCAGGGAAG TTTTCACCTA TATCATTTGT GTATTTCATA 
TTAGTATGTA CAGTAGCGTT GCCTATATTA GCAACCATCT ATGCGTACTT AATATGGTAT
ATCCCAATTA TATATCTCAA CTTCTTAGTA ACATTTGGTT TTGGTTTTGC TATAGCCATT
ACTGTTGGTT ATTTAGTAGT TAGATTGGGT AAAGTACGTA ATTATGGCTT AGCTATTTTG
TTTGCTGTCA TAGCATCACT TGTCGCTTAT TATCTGCAAT GGGTAGTATG GGCTGATTTG
GCTATTAATA CGAGTGAAGT ATATGGTAAT AAACAAATAG GTGTAGCTGT AAGTAATGTG
CAAATTGAAC AATTGCTGTA CTTATTAGGG CATCCGTCAG ACCTTTTTGG GTTGATAGGA
CTTATCAATG AAGAAGGGAC GTGGGCTATA AAAGGGAATA CTGTGAGTGG AGTTTTCCTT
ACCATTATTT GGGTAATTGA ATTCTTAGTA ATTATGATTA TGGGAATAGT TGCCTCTGTA
GGTAGAGCTA AAGAACCTTT TAACGAACTT GCAGATGAAT GGTTTAAAGA AGAAGAATTG
CCTGCTTTTT CTTATATAGA AAATGTAAGC GACTTTAAAC AACAAGCTGA ACAAGGCAAT
TGGGAACAAC TTTCTACAAT TATTCAAAGA GGTGATAAAG GAACTAACCA TAGTGTTTTT
ACTTTGTATG CCTCGGCTAA TGAGTATTAT CTTTCAGTTT CTAACGCTAC GACAAAAAAG
AATAAGAAAG ATAAGATAGA GTTTGATACC GAAGATTTTA TAAAATATCT CAGTATTGAT
AAAACTGTTT ATGACTTATT GAAAAGTAAA ATCTAA
 
Protein sequence
MSNYYKPSGK FSPISFVYFI LVCTVALPIL ATIYAYLIWY IPIIYLNFLV TFGFGFAIAI 
TVGYLVVRLG KVRNYGLAIL FAVIASLVAY YLQWVVWADL AINTSEVYGN KQIGVAVSNV
QIEQLLYLLG HPSDLFGLIG LINEEGTWAI KGNTVSGVFL TIIWVIEFLV IMIMGIVASV
GRAKEPFNEL ADEWFKEEEL PAFSYIENVS DFKQQAEQGN WEQLSTIIQR GDKGTNHSVF
TLYASANEYY LSVSNATTKK NKKDKIEFDT EDFIKYLSID KTVYDLLKSK I