Gene Coch_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0039 
Symbol 
ID8366441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp55079 
End bp55816 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content38% 
IMG OID644982459 
ProductNa(+)-translocating NADH-quinone reductase subunit C 
Protein accessionYP_003140166 
Protein GI256818887 
COG category[C] Energy production and conversion 
COG ID[COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC 
TIGRFAM ID[TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAA AAACAGAAAG TAATTCGTAT ACAGTGATTT TCGCCATTAT AATGGTGGTA 
ATCGTAGGAG CTTTGCTCGC TGGTATTTCA TCAGCATTGA GCAGCGATAT CAGTAACAAT
AAAAAGTTAG AAAAGAAACA AAACATTCTC TACGCTATGG GCGTAAATCA CAACCAAGGT
GAGCTTGGAG GAGGTAAAGT AGAGTTTCTT TCTACAACTG ATGCTGAAAA AGAGTTCCCT
AACTATGTGA AAGAACAATA CCTTATCAAA GGAAATACCG CTGAGAAAGT AGAAGGTGCT
AATGACCTTA TCAATTTCAA CGGTCATCGT GAAGGTTTGC CTCTTTATGT AGGTGAAAAA
GATGGAACTA CACTCTACAT CATTCCCGTA AATGGACGTG GTTTGTGGGA TGCTATTTGG
GGATATATAG CCGTAGATAA AGATCTTGTT GTACGTGGCG TTTTCTTCGA CCATAAAGGA
GAAACAGCTG GTTTAGGAGC TAACATCAAA GAACGTTTCT TTATGGACGA CTTTATCGGG
GAACATTTAT TGGATGCCGC AGGTAACTTC CAAAGCATTC AAATTTCAAA AAGCAATGGC
GATCCTGAAA ATAAACGTAA AGAAGATGGG AAAATTGATG CTATTGCAGG AGCTACCCTT
ACTGGTAATG GAGTGCAAGC GATGATAAGC GATGGCATAG AGCCTTATAT ATCCTATATT
AAAAGTTTAA ACAAATAA
 
Protein sequence
MAVKTESNSY TVIFAIIMVV IVGALLAGIS SALSSDISNN KKLEKKQNIL YAMGVNHNQG 
ELGGGKVEFL STTDAEKEFP NYVKEQYLIK GNTAEKVEGA NDLINFNGHR EGLPLYVGEK
DGTTLYIIPV NGRGLWDAIW GYIAVDKDLV VRGVFFDHKG ETAGLGANIK ERFFMDDFIG
EHLLDAAGNF QSIQISKSNG DPENKRKEDG KIDAIAGATL TGNGVQAMIS DGIEPYISYI
KSLNK