Gene Coch_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0038 
Symbol 
ID8366440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp54425 
End bp55072 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content41% 
IMG OID644982458 
ProductNa(+)-translocating NADH-quinone reductase subunit D 
Protein accessionYP_003140165 
Protein GI256818886 
COG category[C] Energy production and conversion 
COG ID[COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD 
TIGRFAM ID[TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACTAT CAAAAAAAGA TACAAAATTA GTAACCGACC CTCTATGGGA TAACAACCCC 
GTAACAGTAC AAGTGTTAGG TATCTGTTCA GCCTTGGCAA TTACAGCTCA GCTGAAAGCC
GCTATCGTAA TGAGCCTTTC ATTTACCTTT GTGCTTGTAA TGGGTAACGT AACCATTTCT
TTGCTTAGAA ATGTGATTCC ACCAAAAATT CGTATCATCG CCCAGCTAAT TGTAGCAGCT
GCTTTGGTAA TCGTGGTGGA CTTTGTGCTG AAAGCCTATG TGTACGACCT TAGCAAACAG
CTATCGGTAT ACGTAGGGCT TATCATCACT AACTGTATTT TGATGGGACG CTTTGAGGCA
TTTGCTTTAG GTAATCCTCC GGGTAAATCA TTTTTAGATG CTATTGGTAA TGCAGGTGGT
TATTCTATCG CTTTGCTTAT TGTCGCCTTC TTCCGTGAAC TATTAGGTTC AGGCACTTTG
CTCGGTTTCC AAGTATTAGG AGACCCTATT AAGAAAACAG GTGTATATGC TTGGGGCTAT
GAAAACAACG GTTTTATGTT GTTAGCGCCT ATGGCATTAG TAACTTACGG TATAGTAGTG
TGGGTACAAC GTTCACGTAA TAAAGCCTTG ATAGAAGACA GTCATTAA
 
Protein sequence
MGLSKKDTKL VTDPLWDNNP VTVQVLGICS ALAITAQLKA AIVMSLSFTF VLVMGNVTIS 
LLRNVIPPKI RIIAQLIVAA ALVIVVDFVL KAYVYDLSKQ LSVYVGLIIT NCILMGRFEA
FALGNPPGKS FLDAIGNAGG YSIALLIVAF FRELLGSGTL LGFQVLGDPI KKTGVYAWGY
ENNGFMLLAP MALVTYGIVV WVQRSRNKAL IEDSH