Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0038 |
Symbol | |
ID | 8366440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 54425 |
End bp | 55072 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644982458 |
Product | Na(+)-translocating NADH-quinone reductase subunit D |
Protein accession | YP_003140165 |
Protein GI | 256818886 |
COG category | [C] Energy production and conversion |
COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACTAT CAAAAAAAGA TACAAAATTA GTAACCGACC CTCTATGGGA TAACAACCCC GTAACAGTAC AAGTGTTAGG TATCTGTTCA GCCTTGGCAA TTACAGCTCA GCTGAAAGCC GCTATCGTAA TGAGCCTTTC ATTTACCTTT GTGCTTGTAA TGGGTAACGT AACCATTTCT TTGCTTAGAA ATGTGATTCC ACCAAAAATT CGTATCATCG CCCAGCTAAT TGTAGCAGCT GCTTTGGTAA TCGTGGTGGA CTTTGTGCTG AAAGCCTATG TGTACGACCT TAGCAAACAG CTATCGGTAT ACGTAGGGCT TATCATCACT AACTGTATTT TGATGGGACG CTTTGAGGCA TTTGCTTTAG GTAATCCTCC GGGTAAATCA TTTTTAGATG CTATTGGTAA TGCAGGTGGT TATTCTATCG CTTTGCTTAT TGTCGCCTTC TTCCGTGAAC TATTAGGTTC AGGCACTTTG CTCGGTTTCC AAGTATTAGG AGACCCTATT AAGAAAACAG GTGTATATGC TTGGGGCTAT GAAAACAACG GTTTTATGTT GTTAGCGCCT ATGGCATTAG TAACTTACGG TATAGTAGTG TGGGTACAAC GTTCACGTAA TAAAGCCTTG ATAGAAGACA GTCATTAA
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Protein sequence | MGLSKKDTKL VTDPLWDNNP VTVQVLGICS ALAITAQLKA AIVMSLSFTF VLVMGNVTIS LLRNVIPPKI RIIAQLIVAA ALVIVVDFVL KAYVYDLSKQ LSVYVGLIIT NCILMGRFEA FALGNPPGKS FLDAIGNAGG YSIALLIVAF FRELLGSGTL LGFQVLGDPI KKTGVYAWGY ENNGFMLLAP MALVTYGIVV WVQRSRNKAL IEDSH
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