Gene Coch_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0030 
Symbol 
ID8366430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp34475 
End bp34978 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content40% 
IMG OID644982448 
Productacetyl-CoA carboxylase, biotin carboxyl carrier protein 
Protein accessionYP_003140157 
Protein GI256818878 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0146417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAA GAGACATTCA AAATTTAATT AAGTTTGTTG CCAAGTCGGG GGCAAGCGAA 
GTGAAATTGG AAATGGAAGA TGTAAAAATC ACCATTAAAA CGAACCCTGA TGAAAGTGGC
AAAGAGCAAG TGTTTGTACA ACAATTGCCC GTAGCACAAC AGCTACCGCA ATTGCCTTTG
CAACAGCAAG TGCCTGTACA ACAACTTCCT ACAGCTGAAC CTGCTGACAG CAAACCAGCA
ACACCTGCCG ATGACGATAG CAAATACATT ACTATCAAAT CGCCGATGAT TGGTACTTTT
TATCGTCGTC CTGGTCCAGA CAAACCGCTA TTTGTGGAAG TAGGTTCTAC CATAGCCAAA
GGTAGTGTGA TTTGCATTAT TGAGGCGATG AAACTCTTCA ACGAAATAGA ATCAGAAGTT
TCTGGTAAGA TAGTTAAAAT ATTGGTTGAT GATTCTTCAC CTGTAGAATT TGACCAGCCA
TTGTATTTAG TGGATCCTTC ATAA
 
Protein sequence
MDLRDIQNLI KFVAKSGASE VKLEMEDVKI TIKTNPDESG KEQVFVQQLP VAQQLPQLPL 
QQQVPVQQLP TAEPADSKPA TPADDDSKYI TIKSPMIGTF YRRPGPDKPL FVEVGSTIAK
GSVICIIEAM KLFNEIESEV SGKIVKILVD DSSPVEFDQP LYLVDPS