Gene Coch_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0015 
Symbol 
ID8366415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp15657 
End bp17126 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content45% 
IMG OID644982433 
Productinosine-5'-monophosphate dehydrogenase 
Protein accessionYP_003140142 
Protein GI256818863 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0516] IMP dehydrogenase/GMP reductase 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTCC AAGATAAAAT TATTAACGAA GGATTTACCT ATGATGATGT CCTTCTTATC 
CCCAATTATT CTGAGGTATT ACCTCGCGAA GTGTCGATAA CCTCACGTTT TACCCGTAAC
ATCACCCTGA ATGTACCCAT TATCTCAGCG GCTATGGACA CTGTAACCGA AGCTGCTATG
GCTATAGCTA TGGCACGCGA AGGAGGCATA GGAGTGCTCC ATAAAAATAT GACTATTGAG
GAGCAAGCCA AACAAATACG CAAAGTAAAA CGTGCCGAAA GCGGTATGAT TATCGACCCT
GTTACGCTTC CCTTAAACAG CAAGGTGAGT GATGCAAAAC GTTGTATGAA AGAAAACAAT
ATTGGCGGTA TCCCCATTGT TGATGCTAAC GGAATCTTAA AAGGCATTGT AACTAACCGC
GATTTGCGCT TTGAACACGA TAATAATCGC CCAATAACCG AAGTAATGAC CTCTAAAAAC
CTCGTGATTG CCAACGAAGG CACTTCTATG AAGGAAGCTG AGGGTATTTT ACAACGCAGT
AAGGTAGAAA AACTCCCCGT AGTAGATAAA AACTACAAAT TAGTAGGTCT TATTACCTTT
CGAGACATTG CCAATTTGCA AGAAAAATCT ATTTCTAACA AAGATAACTT AGGGCGCTTG
CGCGTAGCAG CAGCCTTAGG GGTTACTACC GATGTAGTAG ACCGTGCCGA AGCTCTTGTA
CAAGCAGGAG TTGATGCTGT AGTTATCGAT ACAGCTCACG GACATACAAA AGGCGTAGTG
AATGCTCTTA AAGCCGTAAA AAGCAAGTTT ACCGACTTAG AAGTAGTGGT AGGAAACATT
GCCACTGCCG AGGCTGCTCT TTATTTGGCT GAAAATGGCG CTGATGCAGT GAAAGTAGGC
ATAGGTCCAG GCTCTATATG TACTACCAGA GTGGTAGCAG GCGTGGGTTA TCCTCAATTA
TCAGCGGTGA TGAGCGTTGC AAACGCTCTT AAAGGTAAAG GAATCCCTGT GATTGCCGAC
GGAGGCATTC GCTACACCGG CGATATCGTA AAAGCCATCG CCGCAGGTGC CAATAGTGTG
ATGCTTGGCT CTCTGCTTGC CGGCACTAAG GAATCACCGG GGGAAACTAT CATTTTCGAA
GGCAGAAAAT ACAAATCTTA TCGCGGTATG GGTTCGGTAG AAGCGATGAA CCAAGGTAGT
AAAGACCGTT ATTTCCAAGA TGTAGAAGAC GATATCAAAA AACTTGTGCC CGAAGGCATT
GTAGGGCGCG TGGCATACAA AGGCGAACTA CAAGAAAGTA TGCATCAGTT CATCGGAGGC
TTGCGCGCAG GTATGGGATA CTGTGGTGCC AAGGATATCG AAACGTTGCA AGCCGTGAGT
CGCTTTGTGC GCATCACTAC AAGCGGAATT ACCGAAAGCC ACCCCCATAA TATTACCATC
ACCAAAGAAG CTCCTAATTA TTCACGTTAA
 
Protein sequence
MNFQDKIINE GFTYDDVLLI PNYSEVLPRE VSITSRFTRN ITLNVPIISA AMDTVTEAAM 
AIAMAREGGI GVLHKNMTIE EQAKQIRKVK RAESGMIIDP VTLPLNSKVS DAKRCMKENN
IGGIPIVDAN GILKGIVTNR DLRFEHDNNR PITEVMTSKN LVIANEGTSM KEAEGILQRS
KVEKLPVVDK NYKLVGLITF RDIANLQEKS ISNKDNLGRL RVAAALGVTT DVVDRAEALV
QAGVDAVVID TAHGHTKGVV NALKAVKSKF TDLEVVVGNI ATAEAALYLA ENGADAVKVG
IGPGSICTTR VVAGVGYPQL SAVMSVANAL KGKGIPVIAD GGIRYTGDIV KAIAAGANSV
MLGSLLAGTK ESPGETIIFE GRKYKSYRGM GSVEAMNQGS KDRYFQDVED DIKKLVPEGI
VGRVAYKGEL QESMHQFIGG LRAGMGYCGA KDIETLQAVS RFVRITTSGI TESHPHNITI
TKEAPNYSR