Gene Coch_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0012 
Symbol 
ID8366412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp12654 
End bp13304 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content36% 
IMG OID644982430 
ProductTrkA-N domain protein 
Protein accessionYP_003140139 
Protein GI256818860 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATT TTTTAGTCAT AGGATTAGGA GAGTTTGGCA AATCGGTAGC CAAAACACTC 
TATAAGAACA AAGCCACTGT GCTAGCAATA GATTCGCGTG AGAGTGTTAT TAAGCAAGCT 
CTCAGTGAAA ATATCATCGA TGAAGCTGTG ATTTTGGACG CTACCGATGA AATTGCCCTC 
AAAAATGTAG TGAAAGACGA TTTCGACACT GCTTTTGTGA GCGTAGGCGA TAATATTCAG 
GCGAGTATCC TTATTACTTT GCAGTTAAAG GAATTGGGAT TAAAAAACAT CATTTGCAAA 
GCCGTAAACC ACACACAAGA AAAGGTTTTA TACAAAATAG GTGCTACACA AGTAGTATTT 
CCAGAGGAAT TAATGGGCGA AAAAGTAGCC TATTCCGTTT TGCGACCTAC CATTATAGAA 
TATTTTAAGT TTGCTGAAGA TTATTTTATC TATGAAGTAA AAGTACCCAA GAGTTATATA 
GGAAAATCGT TGATGGAACT CAATTTGCGA CACAAGTATG AGATAAATAT TTTGGCAATA 
AAGCATTCTG ATGGCAAAAT GAACGTAACA CCCGACCCAA ATGCTAAACT TAGCAAAGAC 
GACCTTTTGG TAATACTCTC CAATACCAAT GTAATTGATA GAATTGTGTA A
 
Protein sequence
MKNFLVIGLG EFGKSVAKTL YKNKATVLAI DSRESVIKQA LSENIIDEAV ILDATDEIAL 
KNVVKDDFDT AFVSVGDNIQ ASILITLQLK ELGLKNIICK AVNHTQEKVL YKIGATQVVF 
PEELMGEKVA YSVLRPTIIE YFKFAEDYFI YEVKVPKSYI GKSLMELNLR HKYEINILAI 
KHSDGKMNVT PDPNAKLSKD DLLVILSNTN VIDRIV