Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0004 |
Symbol | |
ID | 8366403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 4987 |
End bp | 6042 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644982421 |
Product | hypothetical protein |
Protein accession | YP_003140131 |
Protein GI | 256818852 |
COG category | [S] Function unknown |
COG ID | [COG3503] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.326311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAC GACTGATATT TATCGATGTA ATACGCGCTT ATGCCATCTG TATGATGTTA CAAGGACATT TTATCACCGC TTTACTTGCT GAATCATACT GTGACGAAAA TAACCCTTAC TATCATATTT GGCATTATTT CACAGGTATT ACCGCACCTG TATTCCTTAC CATCTCAGGC TTTATCTTTA CCTATTTGCT CATTCGAGAA GGCGAACGCA GTGGTGTAGG ACTCAAGAAC CCACGTGTAA AGAAAGGAGC AAAACGCGGA TTAATGCTTA TAGCTGTGGC GTGTATTTTG CGGAAAAGCA TCTATTTCGT AGATATTTTG CATTGTATAG GGTTAGCTCT CATCATAATG GTAGGACTCT ACTTATTAGC TAGAAATCAC GTGAGGCATT TCCTTCCTAC AATGCTCATC GGCATTACTT TACTACTTTT CACTTTCAAC GAAACCTATA ACCAATATGA ATACTCTTGG TTACCCCAAG TAGTAGCCAA TTACTTCACT CCAAAATACG GTACTTTCTT TACTATTTTT CCGTGGTTAG GCTTTGTAAC CTTAGGAGGC TTTATGGGAT CGCTATTTTA CTATTACAGA AACACCAAAC ACTTATATAC AGTATATACA CTACTACTTA TTGGCATCGG AGCCATTTTT CACTTCCAAT ATCACACATT TCACTTCTTA TACAGCATTA CAGGGTGGGG ACACTTTGAA AGTTTAGCAC GCAATGGCTT TCTTTTTTTG AGAATGGGTG ATACTCTTTG GACATTTGCT GTATTTGTAA TCTTACGAAA TGTACTTACT GCCCATTTTT TACAACGTAT AGGGCAAAAT ACCCTTTCTA TTTACATCAT TCACAGTATT GCGCTCTATC ACTTTATTCC ATATTTCAAC TTAGACCATT ATCTTCATAA AAGCTTAAAT CCTACCCAAG CTGTGATAGG TGCTATTGCC TTTGTGATAG GTATTTTAAT TCTTTCATTC TATTATCACA AAGTCAGCAA ATATATAAAA GAAAAATATT TAAACAAGAA AACCATTGAG AAATAA
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Protein sequence | MKQRLIFIDV IRAYAICMML QGHFITALLA ESYCDENNPY YHIWHYFTGI TAPVFLTISG FIFTYLLIRE GERSGVGLKN PRVKKGAKRG LMLIAVACIL RKSIYFVDIL HCIGLALIIM VGLYLLARNH VRHFLPTMLI GITLLLFTFN ETYNQYEYSW LPQVVANYFT PKYGTFFTIF PWLGFVTLGG FMGSLFYYYR NTKHLYTVYT LLLIGIGAIF HFQYHTFHFL YSITGWGHFE SLARNGFLFL RMGDTLWTFA VFVILRNVLT AHFLQRIGQN TLSIYIIHSI ALYHFIPYFN LDHYLHKSLN PTQAVIGAIA FVIGILILSF YYHKVSKYIK EKYLNKKTIE K
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