| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0002 |
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| Symbol | |
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| ID | 8366401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1652 |
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| End bp | 2602 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644982419 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003140129 |
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| Protein GI | 256818850 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATTA CTCAATACCA ATATGTGTTG GCTGTGGCGA AGTACAAGAA CTTTACTACC
GCTGCTGAAC ACAGTTTTGT TACCCAGCCT ACCTTGAGTA TGCAAGTGCA GAAATTGGAG
GAAGAATTGG GGGTTACTAT TTTTGACAGG AGCAAAAAGC CTTTACAGGT TACTGAAATA
GGAGAACAAA TCGTTAAACA AGCCCAAGTA ATTGTAAATG AAGCGGGGAG AATGAACGAT
ATAGTAGCGC AACAAAAGGG GTATATAGGA GGTGAGTTTC GCGTGGGAAT TATCCCTACC
GTCTCCCCTA CTCTACTACC TATGTTTCTC ACTAATTTCA TCAATAAATA CCCTAAGGTA
TGCCTAAAAA TTGAGGAGCA AACTACTGAA AACATCTTGA AAAAGATAGA GGACGGGAGT
TATGATGCAG GAATTTTGGC AACCCCTCTG CACAATCCGT CGATAGTAGA AAGACCGTTA
TACTATGAGC CTTTTGTGGC TTATATTCCA CAAAATCACC GTTTGCAAAA CTCTAAGACT
ATCTATTCTG AGGATTTGGA TATCAACGAT ATATTGATGC TTGAAGACGG GCATTGTTTT
AAGGACAGTG TACTGAATAT CTGCAACCAA GATGTGATAG ACTCAAAAGA GCACTTCCAA
CTAAAAAGCG GTAGTTTTGA AACCTTGGTA CGCTTGGCTA ACGAAGGCTT AGGAATGACT
TTGTTACCAT ATTTACACTC TTTGGAACTG AAAGAGGAAG AAAAGAAACG CATTCACTAT
TTTGCTGAGC CTTACCCTGC ACGCGAAATC AGCTTGGTAT ATCACAAAAA CGAACTAAAA
ATGCAAATCA TCAAAGCTTT ACACGACACT ATTGCAGGGG TTATACGAGG GGCTATTGTT
TTCCAAAATG TAAAAATTAT CAGCCCAACA AGAGAAAGGC ACAGAATTTG A
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| Protein sequence | MTITQYQYVL AVAKYKNFTT AAEHSFVTQP TLSMQVQKLE EELGVTIFDR SKKPLQVTEI
GEQIVKQAQV IVNEAGRMND IVAQQKGYIG GEFRVGIIPT VSPTLLPMFL TNFINKYPKV
CLKIEEQTTE NILKKIEDGS YDAGILATPL HNPSIVERPL YYEPFVAYIP QNHRLQNSKT
IYSEDLDIND ILMLEDGHCF KDSVLNICNQ DVIDSKEHFQ LKSGSFETLV RLANEGLGMT
LLPYLHSLEL KEEEKKRIHY FAEPYPAREI SLVYHKNELK MQIIKALHDT IAGVIRGAIV
FQNVKIISPT RERHRI
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