| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_4429 |
|---|
| Symbol | |
|---|
| ID | 8393781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 4576553 |
|---|
| End bp | 4580362 |
|---|
| Gene Length | 3810 bp |
|---|
| Protein Length | 1269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644982338 |
|---|
| Product | Na-Ca exchanger/integrin-beta4 |
|---|
| Protein accession | YP_003140049 |
|---|
| Protein GI | 257062161 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.332356 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTAG CTGTAGATTC TATTGAGCCT TTAAATAGCG ACTATTATAA TACTAATCAG
ACCGAAAATA ATTTACTTGA TCAAAGTAAT GGTTGGTTAG ACAGTAATTT GAGTCAACAC
AATTTTTCGA GTTCTAATTT GAGTTGTAAT TGTCCTACTT GCGCTAGTAG CATATCGTCT
GATCCTCAAA ACCTTGTTAG CAATACTGGC AGTTTATCTC CGACTCAAAC ATTAACAACA
ATTCCGACTA ATACCTTACT TTCAGGTTAT AAATGGAGTT TGTCTTCATC TAATCCTGTC
ATCACTTATA GTTTCTACGA AAATGATGTT TTTGGGGGGT CTTATTATGG CAGTGAAACG
GGAGTTAGAG AAGTCAGCCA AGCAGTAAAA ACCAACGTTA GGTCAATTCT TAACTCTTTA
GAAAGCATCA TTAATGTTGA TTTTGTTGAA GTAGTTGAAA CTAATACCAG TACCATAGGA
CAGATGCGTT TTATGGTTTC TAATAATCCT GGTTATGCCT ATGCTTATTA TCCTTATAGT
AATTCGGTAC AAAGCACTGC CGGAGATATT CACTTAAATG GCAGTTATGA TCGTTTAGGG
GATACTAACG GTTTTCAGAA TGCACCCGGA ACCCACGGTT ATATGACTCT CATTCATGAA
ATTGGCCATG CCATGGGGTT AAAACATTCC TTTGAAGCAA CGGCTTTAGA TCCGGCTTTA
GATAATAATA ATTATACGGT CATGGGCTAT AATTTCCTCT ATGGAGATGT GAGTACAGCC
TCGACATTTA TGCCCTTAGA TATTGCTGCT TTACAGTCTC TCTATGGGGC TAAAGCAACT
AATACCACCA ATGATACCTA TCGCTTTACC AATCGCATCG ATCAGTTTAC CATTAATGGT
CAACCATCGG TTACTTCTTC TAATAATATT AAACAAACGA TAGTCGATAC AGGGGGAATT
GATACCCTGG ATTTTTCCCA ATTAGTGAGT TATTCTGCTG GCTATCGTAT TGACTTAAAT
GGGTCAGGGT CAATTACTAA ACAAGATGCT TATCTCAATA CGAATTATAG CGTCAATGGA
GTAACGTATA AATCCACTTC ATCCGGAACA TTTTTATCCT ATGATACAGT AATTGAAAAT
GTTGTTAATA GTAGCAGTAA AGATTCGATT TACCTCAATA GTTCAGCTAA TATCATTAGT
GGCTATAGTT CAACCAAAGC TACAAGCAAT GATGTTATTT ATAATGCTAC TTCTCAAGAT
TTACTTAAAC TTGATTATAA TGCCGCACAA ATAACGAGTA CTCAAAGTGG GAATGATCGC
CTTTTGAGAC TAGGAACAAA TGGGTCTATT ACCCTCAAAA ATTACTATCT TAATACAGCC
AATCAAATCC AAATTAGCTA TCTTGATAGT GTTAATGTTT CTATCAGTGA TGCTCAAATT
CTCGAAGGCA ATAGCGGGAT ACAAAATCTA GTCTTTACGG TTAGTTTAGG GTCTGCGATT
AATCAAAATT TAACCCTTTA CTACAGTACG GCTGATGGAA CTGCAACGGG AGGGGTTGAT
TATGTATCAG CAAGCAATCA AAGCTTAACT TTTTTAGCAG GAGAAACGCA AAGAACGATT
AGTGTTGGAG TTAACGGAGA TTGGGAAATT GAAAATAATG AAACGTTCTT TGTCAATTTG
ATTAATACCC CAAGTAATGT CACACTTGTC GATGGACAAG CAATGGGAAC AATTCTTAAT
GATGATACCC TGCCACAACT TTCTATTGGT GATGTTACAG TTAATGAAAA TGGAATAGCA
ACGGTTAATG TGAGTCTTTC TAGTTCATCT AATTCGACCG TTAGTGTTAA TTATAGTATG
GCCGATGGAA CCGCGATCGC CGATCAAGAT TATATAGCAG AAACTGGTAC ATTAACTTTT
GCAGCCGGGG TCACAACTCA ATCAATTGTT TTAAATAATA TTATCAATGA TTCGAGTTAT
GAAGGTAATA ACGAAACCTT TTTTGTTAAT CTGAGTAGTG CCGTTAATGC CGATATTCAA
GATGGACAAG GAATAGTAAC CATTGTTGAT GATGATATCC TGCCACAGCT TTCTATTGGT
GATGTTACAG TTAATGAAAA TGGAATAGCA ACGGTTAATG TGAGTCTTTC TAATCCATCT
AATTCGACCA TTAGTGTTAA TTATAGTATG GCCGATGGAA CCGCGATCGC CGATCAAGAT
TATATAGCAG AAACTGGTAC ATTAACCTTT GCAGCCGGGG TCACAACTCA ATCAATTGTT
TTGAATAATA TTATCAATGA TTCGAGTTAT GAAGGTAATA ACGAAACCTT TTTTGTTAAT
CTGAGTAATG CCGTTAATGC CGATATTCAA GATGGACAAG GAATAGTAAC CATTGTTGAT
GATGATATCC TGCCACAGCT TTCTATTGGT GATGTTACAG TTAATGAAAA TGGAACAGCA
ACGGTTAACG TCAGCCTTTC TAGTTCATCT AATTCGACCG TTAGTGTTAA TTATAGTATG
GCCGATGGAA CCGCGATCGC CGGTCAAGAT TATATAGCAG AAACTGGTAC ATTAACCTTT
GCAGCCGGGG TCACAACTCA ATCAATTATT TTGAATAATA TTATCAATGA TTCGAGTTAT
GAAGCTAATG ACGAAACCTT TTTTGTTAAT CTGAGTAATG CTGTTAATGC CGATATTCAA
GATGGACAAG GAATAGTAAC CATTGTTGAT GATGATACCC TGCCACAGCT TTCTATTGGT
GATGTTACAG TTAATGAAAA TGGAACGGCA ACGGTTAATG TGAGTCTTTC TAGTTCATCT
AATTCGACCG TTAGTGTTAA TTATAGTATG GCCGATGGAA CCGCGATCAC CGGTCAAGAT
TATATAGCAG AAACTGGTAC ATTAACCTTT GCAGCCGGGG TCACAACTCA ATCAATTGTT
TTGAATAATA TTATCAATGA TTCGAGTTAT GAAGGTAATA ACGAAACCTT TTTTGTTAAT
CTGAGTAATG CCGTTAATGC CGATATTCAA GATGGACAAG GAATGGTGAC AATTATTGAT
AATGATCTTT CTCTACCTAC TCTTTCGATT AGTGACGTAA GTCTCATAGA AGGGAACGTT
CAAGGGAAAA CGAGCAAAAC AACTTTTAGT TTTACAGTCA ATCTTTCTCA AGCAAGTAAT
GAAACAATAA CCCTTAATTA TGCTACAGCT AATGGAACAG CTACCGCAGG TTCAGATTAT
GTTAGCAAGA GTGGAACACT AACGTTTAAT GCGGGAACGA CTAGCCAAAA AATTAGTGTA
ACAGTTAACC GAGACTCTAC TGTTGAAGCC AATGAAACTT TCTTTGTTAA TTTAACCAAT
GCGCTTAATG CTACCTTAGC AGATAGTCAA GGTCAGGGAG TCATTATGAA TGATGATAGT
AGTAGTATTA GTAGCACAAA AAGTAGCTCT ACTACAACTC AATCCTCTAA TATAACAACT
GGTCTTAATT TAAGTCAGTT TGATACCGAT AAGGTCGATA TTTTAACCGG AACTAATGGC
AAAGATACTT TTATTTTGGG CGATAATAAT CGTTCTTTTT ATACCGAGTT TGGTTTAGAT
GATTTTGCAA TAATTAGTGA GTTCAATTCC AACAATGATG TCATTCAATT ACAGGGTAAT
GCTTCTTTGT ATCGGTCAGA GTCCTATGGT ATAGGTAGTC TGCAAGGAAC GGCAATTTTC
CAAACGAATA ATGGTAGCAA TGATTTAGTT GCTATACTAG AAGGCGTTAA TTCTGTTGAT
TTTGAAACAA AAGCTTTCAG TTTTGTTTAA
|
|---|
| Protein sequence | MSVAVDSIEP LNSDYYNTNQ TENNLLDQSN GWLDSNLSQH NFSSSNLSCN CPTCASSISS
DPQNLVSNTG SLSPTQTLTT IPTNTLLSGY KWSLSSSNPV ITYSFYENDV FGGSYYGSET
GVREVSQAVK TNVRSILNSL ESIINVDFVE VVETNTSTIG QMRFMVSNNP GYAYAYYPYS
NSVQSTAGDI HLNGSYDRLG DTNGFQNAPG THGYMTLIHE IGHAMGLKHS FEATALDPAL
DNNNYTVMGY NFLYGDVSTA STFMPLDIAA LQSLYGAKAT NTTNDTYRFT NRIDQFTING
QPSVTSSNNI KQTIVDTGGI DTLDFSQLVS YSAGYRIDLN GSGSITKQDA YLNTNYSVNG
VTYKSTSSGT FLSYDTVIEN VVNSSSKDSI YLNSSANIIS GYSSTKATSN DVIYNATSQD
LLKLDYNAAQ ITSTQSGNDR LLRLGTNGSI TLKNYYLNTA NQIQISYLDS VNVSISDAQI
LEGNSGIQNL VFTVSLGSAI NQNLTLYYST ADGTATGGVD YVSASNQSLT FLAGETQRTI
SVGVNGDWEI ENNETFFVNL INTPSNVTLV DGQAMGTILN DDTLPQLSIG DVTVNENGIA
TVNVSLSSSS NSTVSVNYSM ADGTAIADQD YIAETGTLTF AAGVTTQSIV LNNIINDSSY
EGNNETFFVN LSSAVNADIQ DGQGIVTIVD DDILPQLSIG DVTVNENGIA TVNVSLSNPS
NSTISVNYSM ADGTAIADQD YIAETGTLTF AAGVTTQSIV LNNIINDSSY EGNNETFFVN
LSNAVNADIQ DGQGIVTIVD DDILPQLSIG DVTVNENGTA TVNVSLSSSS NSTVSVNYSM
ADGTAIAGQD YIAETGTLTF AAGVTTQSII LNNIINDSSY EANDETFFVN LSNAVNADIQ
DGQGIVTIVD DDTLPQLSIG DVTVNENGTA TVNVSLSSSS NSTVSVNYSM ADGTAITGQD
YIAETGTLTF AAGVTTQSIV LNNIINDSSY EGNNETFFVN LSNAVNADIQ DGQGMVTIID
NDLSLPTLSI SDVSLIEGNV QGKTSKTTFS FTVNLSQASN ETITLNYATA NGTATAGSDY
VSKSGTLTFN AGTTSQKISV TVNRDSTVEA NETFFVNLTN ALNATLADSQ GQGVIMNDDS
SSISSTKSSS TTTQSSNITT GLNLSQFDTD KVDILTGTNG KDTFILGDNN RSFYTEFGLD
DFAIISEFNS NNDVIQLQGN ASLYRSESYG IGSLQGTAIF QTNNGSNDLV AILEGVNSVD
FETKAFSFV
|
|---|
| |