Gene Cyan8802_4348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_4348 
Symbol 
ID8393700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp4499833 
End bp4502568 
Gene Length2736 bp 
Protein Length911 aa 
Translation table11 
GC content37% 
IMG OID644982258 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_003139969 
Protein GI257062081 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.485697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTG AATTAGACGA AGCTACTATT GCCGCCATGA TTCAAGAAGC CCGTCAGTGC 
TTTTTAGAAG AAGATGCCCC CGAAGACCTA AAAACCCTTC AAGAAGGGGT AAAACAGGGT
CAAAATTGCA CTGATTTCAA ATCTCTCTTA CGGGCAGCCC ATTCCTTAAA AGGGGGCGCA
GGTATCGCTC AACTGTCTAG TTTAGGAGAA TTAGCCCATC AACTCGAAGA TGTTCTTGAA
GCACTTTACC AAGGAGAAAC GACTCATCCT AATGAAGCCT GGATGCTGAT GGAATGGGGA
GTCCATGAAA TCGCTATGAT GTTAAATCAG GCGCAAACAG TGGAAACGGT GAGTGCTGAC
CCTAATTTAG TTCAGGCTTT AACTGAGTTT ACTACCACTA AACCCCTTGT CGGAGTCTCT
GAAACAATCT TGAGTTCAGA TAATAGTAAT TCTTTGATTC AAACGCTTTT AGAGAATGAT
TTAGAGACTT GCTGCACTCG AATTGAGCAA TTATCGCAAG AAACTTCCAG CGAACAAATA
CAAGAAGCAA TTACGACTTT TTATAATGAG TGTTTATTAT TAGGAGAAAC TCTAGATTTA
CCTTGGCTTA TTGAAATTAT TGACCCCTTA AAAGCTATTT TAAAACAAGT CGAACCTCTG
GAGGCGTTAC AAATAACCCA ACAGTTAATT ATTGAATTAC GGCAGCAACG TAAGGCTTAT
TTAACAGGGG AGTATTCTAG TGGGGGTTCC TCTATTTCAT CGGTATCAGT GACTACTTTT
GATGACGAAG AATGGTCTAA TGATGGGTTA GAAGATGATT GGAACAATGA ATTAGATTTT
CTTGGAGATT TAACAGATAA TCAAACCCCT ATAAATAATC AGGATTTTTG TTCTCAACCC
ATAGAGGAAG AATTAACCCC ACTTTCTCAG TTACGCATTC CTTTAGAACG GTTAGAAGGA
ATGACCAATA ATATTGAAGA ATTATTAGTC GCTAAAGAAA GACTTTGTTT GCAACAGCAA
CAGTTAAGTC AAGTGACACG ACAATTACGA CAAATTACCC GTCAGTTTGC TCCTATTACT
CAACATATTC AAACCTTTTA TGATCAATTA GCGATCGCAC CTTTATCTGC TACTACTTCG
AGAAATGAAG ACTTTGATGC GTTGGAATTA GATGGTTTTA CTGAAGTTCA TAGTAGTTTA
CAAACCTTTC AGGAATTGAT CTTAAAAATT CAAGAAAACT ATGCCGATCT TAATTTAATT
AATCAAGACT TTGCTGACAA TGTAGAAGTC GTTCATACCA ATTTAGATAA CCTATACACT
AATATTACTG AATCTCGCCT CGTTCCTTTT GCAATGATGG CTCAGCGATT TATTCCTCAG
ATTCAATATC TCAATCGTCG TTTTGGCAAA TCAGTAGAAT TATCCTTACA AGGAGAAGAA
ATCTTAATTG ATCAAATCAT TTTAGAACAA CTGCAAACCC CTTTAACCCA TTTAATTAAT
AATGCTTTTG ATCATGGTAT TGAAGAACCA CAAGAACGAT TGATAAAACA AAAATCAAAA
ATGGCTAAAA TTCGTTTAGA AGCTAAAGTT GACAATAATC AATTGGTCAT TATTTTAAGT
GATGATGGTC AAGGCATTGA TTTATACAAA GTTTATCAAA AAGCTAAAAT CAAAGGCATT
GCTGAAGCAA ATACTCCCTT TGAAGAATTG TCAAAAACTA ATATTTTAAA TTTGATTTTT
AGGCCAAATT TTTCTACCGC TAAAACAATT AATGAACTGT CTGGCAGGGG AATGGGCTTG
GATATTGTTC GTAGCAAAAT CCAAAAATTA CGAGGAACGA TTGTCGTTGA AACTGAAGAG
AATCAAGGAA CAACATTTAT CATGAAAATT CCCTTGAATT TAAGCTTGAT GCCTCTCTTT
TTATTGCAAT GGCAAAATAA TCTATTAGCC ATTCCTACCG CTAGCGTTTT AGATAGTATT
CCCATTAATG AAATTGTCTG GATAGATCAA AATTCAAGTT TAGTAAACTG GCGAGGAAAT
CCGATTTCAG TCATTTCTCT CTCAGAAGTA TTGTGTTATC CGCAAAGTTC AAAAGAGTCA
ATTGCTCCGC AAATAGCTAT GGTTTTAGAT AACTTTTGCA CTCCCTTTAT GGTCATGGTA
GATAGTTTAC TCAGTGAACA AAAACTCATT GTTAAACCCT TTGATGACAC CGTAACCACC
CCTAACTATT TAGCTGGTTG TACCATTTTA GGAGGAGGAG AAATTGCTCC GGTTATTCTT
CCCCATTCCT TGAACATTAC ACTACCCCGC AACAAAACTG AGCAACCAAC CATTACTTAT
CCCGTTTCAA ACGCCAACCA ACCAACAATT TTAGTAGCCG AAGATTCGGT CGCTACTCGA
CGTTTACTCG AACGACTGTT AACAAAAGTC GGGTTTTCTG TGATTGTTTG TCGTGATGGA
CAAGACGCTT TAGATCAACT CTCTCAATAC AATAGAAATA TTAATCTCAT TATTTCTGAT
GTTGAAATGC CGCGTCTCAA TGGGTTTGAA CTACTCAAAA CCATCCGTTC TGACAAGAAC
TGGCAAAAAA TTCCTGTGGT AATGGCTACC TCCCGCACGG GACAACACCA TCAACAACAA
GCGATGCAAT TAGGAGCGAA TGCCTATTTA GGTAAGCCAA TTTTACCCAA TATTTTATTA
GAAACCATTG ACCCTCTACT CAACCCTGTT AGTTAA
 
Protein sequence
MSFELDEATI AAMIQEARQC FLEEDAPEDL KTLQEGVKQG QNCTDFKSLL RAAHSLKGGA 
GIAQLSSLGE LAHQLEDVLE ALYQGETTHP NEAWMLMEWG VHEIAMMLNQ AQTVETVSAD
PNLVQALTEF TTTKPLVGVS ETILSSDNSN SLIQTLLEND LETCCTRIEQ LSQETSSEQI
QEAITTFYNE CLLLGETLDL PWLIEIIDPL KAILKQVEPL EALQITQQLI IELRQQRKAY
LTGEYSSGGS SISSVSVTTF DDEEWSNDGL EDDWNNELDF LGDLTDNQTP INNQDFCSQP
IEEELTPLSQ LRIPLERLEG MTNNIEELLV AKERLCLQQQ QLSQVTRQLR QITRQFAPIT
QHIQTFYDQL AIAPLSATTS RNEDFDALEL DGFTEVHSSL QTFQELILKI QENYADLNLI
NQDFADNVEV VHTNLDNLYT NITESRLVPF AMMAQRFIPQ IQYLNRRFGK SVELSLQGEE
ILIDQIILEQ LQTPLTHLIN NAFDHGIEEP QERLIKQKSK MAKIRLEAKV DNNQLVIILS
DDGQGIDLYK VYQKAKIKGI AEANTPFEEL SKTNILNLIF RPNFSTAKTI NELSGRGMGL
DIVRSKIQKL RGTIVVETEE NQGTTFIMKI PLNLSLMPLF LLQWQNNLLA IPTASVLDSI
PINEIVWIDQ NSSLVNWRGN PISVISLSEV LCYPQSSKES IAPQIAMVLD NFCTPFMVMV
DSLLSEQKLI VKPFDDTVTT PNYLAGCTIL GGGEIAPVIL PHSLNITLPR NKTEQPTITY
PVSNANQPTI LVAEDSVATR RLLERLLTKV GFSVIVCRDG QDALDQLSQY NRNINLIISD
VEMPRLNGFE LLKTIRSDKN WQKIPVVMAT SRTGQHHQQQ AMQLGANAYL GKPILPNILL
ETIDPLLNPV S