Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4223 |
Symbol | |
ID | 8393574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 4360528 |
End bp | 4362273 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644982135 |
Product | Carbohydrate-selective porin OprB |
Protein accession | YP_003139847 |
Protein GI | 257061959 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.219563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.747154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAGAC TGTTAAACCA ACTGGTCAAA ATAACCCCAG GTCTTTTAGG CTGCCTATTT TTAGTAGCTC AAAGTGCGAT CGCTTCTCCT AAGACCGATT TTGAAACCGC TAACCCTGAG ACAATCAACC CTGATGAGGC TTTAGGGGTT CTGCGAAACC GTCCTCAAAT GGACAATCCC ATGAATCGGA CTTCTGGGCA AAAATTTAAT ACTTCCGCTT CCCAAGTCAC CAGCGTTTCC GAGTTACGCG ACGTTCAACC CACCGAATGG GCTTATGAAG CTCTCCGTAG TCTCGTTGAA CGCTATGGTT GTATCGTGGG ATATCCTGAC CGCACCTTCC GAGGCAACCG AGCCCTGAGT CGTTGGGAAT TTGCAGCCGG GTTAAACGCT TGTTTAAACA CTATTGAACG GTTATTACAG GAAAACGTCG CCGTTCTACG CGAAGATATC GAAAAACTCA AGCGACTTGC CCAAGAATTT GAAGCAGAAC TCGCTGCGTT AGGGTCAAGG GTGAGTAACC TTGAAAGTCG AGTATCCTAT CTCGAAGATC ACCAATTTTC CACCACCACC CAGTTAAAAG CCACTTCTAT CTTTACCTGG TCTAATGCTT GGGGTGAACG AGCCCTAGAC TACCGCGAAC AAGATACCTA TAACCAGGCC ATACAAAACA GAAGAAACAC AACAGCTAAA CGACGGCTTG ATGATAACTC CACCCTAGGT TATCGGGTTC GTCTTAACTT CAATACCAGC TTTAGCGGGA AAGATATGCT GACGGCTCGT CTTCAAGCGT TGACCATCGT TAACTATGCT AACCCCACAG GGACTAGTAT GGCACGGTTG GGACACGATG CCAACAACGA CTCTAATGTT GTTATTGACA ACTTGTGGTA TCGCTTCCCC ATTGGTCAGT TTACGGGGTA TGTGGGTGGT ACTGGTCTAG ACGTGGATGA TATCTTTGAT ACAGGAAACC CCTACGGTAC CAGCTCCGAT ACAGGGGCTC TGTCGCGGTT CATGCGTTAC GATCCCCTAA CCATGCGGGG GACTGAAGGG ATCGGTGCAG GTTTTGCCTA CAAATTCAAT GATATGTTCA CCGTTCGAGG ACTTTACTTG ACTCCTGGTG GAGAAGGTAA TGATCCCTCT CAAGGACGAG GTTTATTTAA CGGTAGCTTC ACGGCAGGGG GTCAAATTGG CTTTAAACCC ACCGATGGCT TAACCTTTAA TGCCCAGTTC TTGCATAAGT ACTTCCGTCC TAATGGTGTC AACGTTACCC ATGGTACCGG TTCGGGTATT GCGAGTGATC CTTTCTTGGG CGCAGCGACT ATCACCGATA ACTATGGACT CAACGGTAAC TGGCGCATCA ACGAAACCTT TAACCTCACG GGTTGGGTGG GTTATGCTTT AGCCCGTGGT CAAGGCCTCG ATAGTCGCGG CAGAAGTCGT CGTGGTTTGG GAGCTGATAT CTGGTCTTGG ATGGTTGGAC TCAATGTCAT TGACTTATTC AAAGAGGGAG CCGTCTTCTC CGTTGGGGGT GGTTCTATTA CCAATGCGCG TCGCGTTGAT GCCCTCACGG GAGATTTGAC GGTTCCTGAC CAAGATACTC CCTACATCAT TGAAGGACAA TATCGCTATC CTCTCAATAA AAACATTGAT ATTACCCCCG GTCTTTATGT CATCCTTGAA CCCGATGGTA ATAATCAAAA CAACAGTATT TGGGTTGGCG TAGTTCGGAC TACTTTTAAG TTCTAA
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Protein sequence | MSRLLNQLVK ITPGLLGCLF LVAQSAIASP KTDFETANPE TINPDEALGV LRNRPQMDNP MNRTSGQKFN TSASQVTSVS ELRDVQPTEW AYEALRSLVE RYGCIVGYPD RTFRGNRALS RWEFAAGLNA CLNTIERLLQ ENVAVLREDI EKLKRLAQEF EAELAALGSR VSNLESRVSY LEDHQFSTTT QLKATSIFTW SNAWGERALD YREQDTYNQA IQNRRNTTAK RRLDDNSTLG YRVRLNFNTS FSGKDMLTAR LQALTIVNYA NPTGTSMARL GHDANNDSNV VIDNLWYRFP IGQFTGYVGG TGLDVDDIFD TGNPYGTSSD TGALSRFMRY DPLTMRGTEG IGAGFAYKFN DMFTVRGLYL TPGGEGNDPS QGRGLFNGSF TAGGQIGFKP TDGLTFNAQF LHKYFRPNGV NVTHGTGSGI ASDPFLGAAT ITDNYGLNGN WRINETFNLT GWVGYALARG QGLDSRGRSR RGLGADIWSW MVGLNVIDLF KEGAVFSVGG GSITNARRVD ALTGDLTVPD QDTPYIIEGQ YRYPLNKNID ITPGLYVILE PDGNNQNNSI WVGVVRTTFK F
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