| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_4128 |
|---|
| Symbol | rbgA |
|---|
| ID | 8393479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 4255184 |
|---|
| End bp | 4256029 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644982045 |
|---|
| Product | ribosomal biogenesis GTPase |
|---|
| Protein accession | YP_003139757 |
|---|
| Protein GI | 257061869 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACAA TTCAATGGTA TCCTGGTCAT ATTTCCAAAG CAGAACGACA ACTCAAAGAA
CAACTCAACC GAGTGGATGT TGTTCTCGAA GTCCTCGACG CACGCATACC CCTTGCTTCC
CATCATCCCC AAATTCCCCA ATGGATAGGA CAAAAACCCC GAATTTTAGT CATTAACCGC
GTGGATATGA TTCCAGACTT CGTTCGTCAA CAATGGTTAA GCTGGTTCAC CCACAACAAC
GAAACCCCCT ACTTTACCAA TGCTAAACAA GGAACTGGGG TAAAAGCCAT CCTCAAAGCA
GCCCAACAAA CGGGAGTCGC CATGAACCAG CGAAGACACG ATCGCGGAAT GCGTCCCCGT
CCCGTTCGCG CTGTTGTCAT TGGAATGCCC AACGTAGGCA AATCCGCCTT GATTAATCGT
CTATTAGGGC GTAAAATCGT AGAAAGTGCC AGACGTGCGG GTGTTACCCG TCAACTGAGG
TGGGTTCGCA TTTCTGAGGC AATCGAACTC CTAGACTCTC CAGGGGTAAT TCCAGGGAAG
CTAGAAAATC AAAAAGATGC AGCAAAACTC GCCATCTGTG AAGATATTGG CGAAGCTGCC
TATGATAATC AAGAAATGGC GGCTATCTTA GTTGATTTAC TCGTTGAGTT GAATTTTGAG
CAAATCTTAC CCTCTCGTTA TCAGATCGAT CCTTTAGACA TGAGTGGAGA AGAGTATGTT
CATGCACTGG GCTATGAACG ATACCAAGGA GACCTAGAAA GGGCTGCCTT GCAATTACTC
AACGATTTTC GCAAAGGGTT CATGGGAGCT ATTCCCCTAG AATTTCCCCC AGACGTAAAA
GCTTAA
|
|---|
| Protein sequence | MPTIQWYPGH ISKAERQLKE QLNRVDVVLE VLDARIPLAS HHPQIPQWIG QKPRILVINR
VDMIPDFVRQ QWLSWFTHNN ETPYFTNAKQ GTGVKAILKA AQQTGVAMNQ RRHDRGMRPR
PVRAVVIGMP NVGKSALINR LLGRKIVESA RRAGVTRQLR WVRISEAIEL LDSPGVIPGK
LENQKDAAKL AICEDIGEAA YDNQEMAAIL VDLLVELNFE QILPSRYQID PLDMSGEEYV
HALGYERYQG DLERAALQLL NDFRKGFMGA IPLEFPPDVK A
|
|---|
| |