Gene Cyan8802_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3988 
Symbol 
ID8393338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp4102152 
End bp4102553 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content33% 
IMG OID644981912 
ProductPilT protein domain protein 
Protein accessionYP_003139626 
Protein GI257061738 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0532731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATT TATTAGATAC TAATTGCTGT ATTGTTTATC TTAATGGCAG AAACCTGATT 
TTAAAGTCTA GATTAGAAAG TCATCTAGAT TCAGAAATAG CGGTTTGTTC AGTGGTAAAA
GCTGAATTGT TTTACGGTTC ACAAAAAAGT GTCAATACAG CTAAAAGTAT CGCCAAACAA
AAGATATTTT TGCGTCGTTT TGTTTCCCTT TCTTTTGATG ATAAGTCAGC CGAAATTTAT
GCTCCTATTC GAGCAGATTT AGAACAAAAA GGAACGCCTA TCGGTGCTTA TGATTTACAA
ATTGCTGCTA TTGCAATGGC AAATAATTTA ACGCTTGTAA GTCATAATCT TAGGGAATTT
GGACGCATTA ACGGGTTATT ATTTGAAGAT TGGAAGGTTT AG
 
Protein sequence
MIYLLDTNCC IVYLNGRNLI LKSRLESHLD SEIAVCSVVK AELFYGSQKS VNTAKSIAKQ 
KIFLRRFVSL SFDDKSAEIY APIRADLEQK GTPIGAYDLQ IAAIAMANNL TLVSHNLREF
GRINGLLFED WKV