| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3973 |
|---|
| Symbol | |
|---|
| ID | 8393323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 4089302 |
|---|
| End bp | 4089799 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644981897 |
|---|
| Product | Peroxiredoxin |
|---|
| Protein accession | YP_003139611 |
|---|
| Protein GI | 257061723 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000360978 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAG CACAAGCACC TGCCTCCATT TACGACCTTT CTGCCACCAG TATTAATGGG
ACTCCCGTGT CCTTAAACGA CTACAAAGAT AAAGTCTTAC TAATCGTCAA TACCGCCAGT
CAATGTGGCT TTACACCTCA ATATAAGGGA TTACAGGCGT TATATGACCA ATACGCCAGC
CAAGGGTTAG TGGTTTTAGG CTTTCCCTGT AACCAATTCG GACAGCAGGA ACCTGGAACC
TCCGATCAAA TTCAGTCGTT TTGTGAAGTC AACTTTGGCG TTTCCTTTCC CCTGTTTCAG
AAAATCGATG TCAATGGCAG CAATGCCCAT CCATTGTATC AGTATTTAAC TAAAGCTGTC
CCTGGTATTT TGGGAATTGA AGCCATTAAG TGGAATTTCA CGAAATTTCT AGTTGATCGC
AGTGGCAAAG TCGTTAAACG CTATCCTCCC ACCACCAAAC CCGAAGATAT AGCCAAAGAT
ATTCAAGCAT TACTATAG
|
|---|
| Protein sequence | MTTAQAPASI YDLSATSING TPVSLNDYKD KVLLIVNTAS QCGFTPQYKG LQALYDQYAS
QGLVVLGFPC NQFGQQEPGT SDQIQSFCEV NFGVSFPLFQ KIDVNGSNAH PLYQYLTKAV
PGILGIEAIK WNFTKFLVDR SGKVVKRYPP TTKPEDIAKD IQALL
|
|---|
| |