| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3966 |
|---|
| Symbol | |
|---|
| ID | 8393316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 4079962 |
|---|
| End bp | 4083600 |
|---|
| Gene Length | 3639 bp |
|---|
| Protein Length | 1212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644981890 |
|---|
| Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
|---|
| Protein accession | YP_003139604 |
|---|
| Protein GI | 257061716 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0010778 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA AAACCTACGC TACTATTGAT GGAAACGAAG CCGTTGCTAG AGTTGCTTAT
CGCCTCAATG AAGTGATCGC CATCTATCCC ATTACCCCCT CCTCACCCAT GGGAGAATGG
GCTGACGCTT GGTGCTCAGA AGGACGGACG AACCTGTGGG GAACAGTCCC CTCTATTGTC
GAAATGCAAA GCGAGGGAGG GGCAGCAGGA GCAATACACG GATCTTTGCA AACAGGGGCG
TTAACAACCA CGTTTACCGC CTCTCAGGGC TTATTATTGA TGATTCCCAA CCTCTACAAG
ATAGCGGGAG AACTGACGGC AACCGTCATC CACGTTGCCG CGCGATCGCT GGCTGCCCAA
GGGTTGTCTA TTTTCGGGGA TCACGGGGAT GTCATGGCCG CCCGTAGTAC CGGGTTTGCG
TTGATCAGTT CTGCATCCGT GCAAGAAGCG CAGGATCTCG CAGCCATTAC TACAGCCGCC
AGTTTTGAGT CGAGAGTCCC TGGAATGCAC TTTTTTGACG GTTTTCGGAC TTCCCACGAA
GTGCAGAAGG TGGAGTTATT GGACGATAGT GTGTTGCGAT CGCTGATCCA AGATGAATGG
GTCATTGCCC ACCGCGATCG CGCTTTAACC CCTGATCGCC CCGTGATTCG AGGTACTGCT
CAAAACCCCG ATGTTTACTT CCAGGCTAGA GAAACAGTTA GCCCATTTTA TACAGCTTAT
CCCGAAATTC TGCAAAAAGC AATGGATAAG TTTGCTCAAC TGACGGGACG ACAATATCAC
CTCTTTGATT ATCATGGTCA TCCTGAAGCT GAACGGGTCA TTATTTTGAT GGGTTCCGGT
TGTGAGACAG TCCAGGAAAC CGTAGATTAT CTATTAAGTC AAGGGGAAAA AGTTGGAGTC
CTAAAAGTTC GTTTATACCG TCCCTTTGAA GCCACAAAAT TAATTGAAGC TTTACCTAAA
ACCGTCAAAA AAATAGCTGT TCTAGATCGA ACGAAAGAAC CAGGATCAGC CGGAGAACCC
TTATATTTAG ATGTTGTTAC GTCCTTTGTT GAGGCATTTC ATGAAATGCC CCTCCCGAAA
ATTGTCGGAG GACGCTATGG GTTATCCTCT AAAGAATTTA CCTCCGCAAT GGTCAAAGGA
ATCTTTGATA ACCTTACTTT AGATAATCCT AAAAATCACT TTACTATTGG TATAAAGGAC
GATGTTAGCC ATACAAGTAT TAATTACGAT CCTAACTTTT CTACTGAACC TGATAACGTC
GTTCGCGCTA TTTTCTATGG CTTAGGATCA GATGGAACGG TGGGAGCCAA CAAAAACTCT
ATTAAAATTA TTGGGGAAGA AACCAATAAT TATGCCCAAG GTTACTTTGT TTATGACTCG
AAAAAATCGG GTTCTGTTAC CGTTTCTCAT CTTCGTTTTG GTCCTAACCC TATTCAGTCT
ACTTACTTAG TAACTAAAGC CAATTTTATC GCTTGTCATC AATGGGAGTT TGTCGAAAAA
TTCGATTTAT TAGAATCTGC CATTGATGGA TCAACCTTAT TACTTAATAG TCCCTACAAA
CCCGAAGAAA TTTGGCATCA TTTCCCCCGT TCCATGCAGG AACAAATGAT TAATAAACAC
CTCAAAGTCT ATACCATCAA CGCTTACGAA GTCGCCAAAA ATGCAGGAAT GGGAGGACGG
ATAAACACCG TTATGCAAGT GTGCTTCTTT GCCCTATCAG GGGTATTACC GAGAGATGAA
GCGATAGAAC AGATTAAAAA GGCTATTCGT AAGACTTACG GTAAAAAAGG CGAAGAAATC
GTTCAAATGA ACATGAAAGC GGTTGACGCA TCCCTAGATC ATCTCCATGA AATAACGATA
CCGACTGCGG TAGATAAAGA TGCCAGCGAG ATCAGTCATC CCATTCCTGA CAGAGCCCCC
GCATTCGTTC GGGATGTTCT AGGAAAAATG CTGGCCCGTC AGGGAGACGA GATCCCCGTT
AGTGCTTTAC CGTGCGATGG AACCTACCCC AGTGGGACAG CAAAATGGGA AAAACGCAAC
GTCACCCAAG AGATACCCGT TTGGGACCCA GATGTCTGCG TTCAATGTGG TAAATGTGTA
TTAGTTTGTC CTCATGCGGT CATCCGATCC AAAGTTTACG AAGAAACTGC CTTAGTTAAT
GCACCTGAAA CCTTCAAAAC CGCGTCAGCA AAGGATCTCG ACTGGAAGAA AACCCAATTA
AAATTCACCA TCCAAGTCGC TGCGGAAGAC TGTACCGGAT GCGGGGTTTG CGTCGATGTT
TGTCCAGCTA AAAACAAATC TCAACCCAAA CTCAAAGCTA TCAATATGGC CCCGCAGTTG
CCAATACGGG ACCAAGAACG GGAAAATTGG GACTATTTCC TCTCTATTGC TAACCCCGAT
CGCAATACCC TAAAATTGAA TAAAATTAGC CATCAACAGA TGCAAGAACC GTTATTCGAG
TTCTCTGGTG CTTGTGCAGG ATGTGGCGAA ACCCCCTATA TTAAATTAGC GACTCAATTA
TTCGGCGATC GCATGGTAGT CGCTAATGCA ACGGGATGTT CTTCTATTTA CGGGGGAAAC
CTTCCTACTA CTCCTTGGTC ATATAACCAA GAAGGACGCG GACCCGCTTG GTCAAACTCT
CTGTTTGAAG ATAATGCTGA ATTTGGGTTA GGGTTTCGGG TTTCCATCGA TAAACAAGCA
GAGTTTGCAG CAGAACTGCT TAAAAGTCTT GCTAGTGAAG TCGGAGACAG TTTAGCTACT
GCTATCTTAA CCACGCAGCA AACCGACGAA GCAGACATCT TTGAACAACG GGAACAAGTA
GCTATCCTGA AGCAACGGTT AGCAGAATTA AGCAATAGTA ACCTAGACGA TTCAATTCAG
GCAAAAGTAA CCATGTTAAA GTCGTTAGCC GACTATTTGG TTAAAAAGAG TGTCTGGATT
ATTGGGGGTG ACGGTTGGGC TTATGATATT GGTTACGGTG GGTTAGATCA CGTCTTAGCC
AGTGGTCGCA ACGTCAACAT TTTGGTCATG GATACGGAAG TTTATTCTAA CACGGGGGGA
CAAGCCTCCA AAGCCACTCC TCGCGCTGCT GTAGCGAAAT TTGCCGCAGG GGGGAAAGCG
TCACCCAAGA AAGACTTAGG GTTAATGGCT ATGACCTATG GTAACGTCTA TGTAGCGAGT
GTGGCTATGG GTGCTAAAAA TGAGCAGACT ATCAAAGCAT TCCTAGAAGC AGAAGCTTAT
CAAGGAGTCT CATTAATTAT CGCCTATTCT CATTGTATTG CTCATGGTAT TAATATGACC
ACAGCCATGA GTTATCAAAA AGAAATTGTA GACAGTGGAC GGTGGTTATT GTATCGCTAT
CATCCCGATT TAATCCTACA AGGAAAGAAC CCCTTACAGT TAGATATGGG TCGTCCTAAG
CTTCCCATTG AACAGACGAT GTATCAAGAA AACCGCTTCA AAATGTTAGC AAGAAGTAAA
CCCGATGCAG CCAAAAAACT GCTGAAAGAA GCGCAAGAGG ATGTTAATAC CCGTTGGAAA
ATGTATCAAT ATTTAGCTGT AAGACAGTTA GAAACAGGTA ACGGGAATGG ACATAGTAAA
GCAACTGTTC AATCTGAAAC ATCAGTCAGT GAAGTTTAG
|
|---|
| Protein sequence | MNAKTYATID GNEAVARVAY RLNEVIAIYP ITPSSPMGEW ADAWCSEGRT NLWGTVPSIV
EMQSEGGAAG AIHGSLQTGA LTTTFTASQG LLLMIPNLYK IAGELTATVI HVAARSLAAQ
GLSIFGDHGD VMAARSTGFA LISSASVQEA QDLAAITTAA SFESRVPGMH FFDGFRTSHE
VQKVELLDDS VLRSLIQDEW VIAHRDRALT PDRPVIRGTA QNPDVYFQAR ETVSPFYTAY
PEILQKAMDK FAQLTGRQYH LFDYHGHPEA ERVIILMGSG CETVQETVDY LLSQGEKVGV
LKVRLYRPFE ATKLIEALPK TVKKIAVLDR TKEPGSAGEP LYLDVVTSFV EAFHEMPLPK
IVGGRYGLSS KEFTSAMVKG IFDNLTLDNP KNHFTIGIKD DVSHTSINYD PNFSTEPDNV
VRAIFYGLGS DGTVGANKNS IKIIGEETNN YAQGYFVYDS KKSGSVTVSH LRFGPNPIQS
TYLVTKANFI ACHQWEFVEK FDLLESAIDG STLLLNSPYK PEEIWHHFPR SMQEQMINKH
LKVYTINAYE VAKNAGMGGR INTVMQVCFF ALSGVLPRDE AIEQIKKAIR KTYGKKGEEI
VQMNMKAVDA SLDHLHEITI PTAVDKDASE ISHPIPDRAP AFVRDVLGKM LARQGDEIPV
SALPCDGTYP SGTAKWEKRN VTQEIPVWDP DVCVQCGKCV LVCPHAVIRS KVYEETALVN
APETFKTASA KDLDWKKTQL KFTIQVAAED CTGCGVCVDV CPAKNKSQPK LKAINMAPQL
PIRDQERENW DYFLSIANPD RNTLKLNKIS HQQMQEPLFE FSGACAGCGE TPYIKLATQL
FGDRMVVANA TGCSSIYGGN LPTTPWSYNQ EGRGPAWSNS LFEDNAEFGL GFRVSIDKQA
EFAAELLKSL ASEVGDSLAT AILTTQQTDE ADIFEQREQV AILKQRLAEL SNSNLDDSIQ
AKVTMLKSLA DYLVKKSVWI IGGDGWAYDI GYGGLDHVLA SGRNVNILVM DTEVYSNTGG
QASKATPRAA VAKFAAGGKA SPKKDLGLMA MTYGNVYVAS VAMGAKNEQT IKAFLEAEAY
QGVSLIIAYS HCIAHGINMT TAMSYQKEIV DSGRWLLYRY HPDLILQGKN PLQLDMGRPK
LPIEQTMYQE NRFKMLARSK PDAAKKLLKE AQEDVNTRWK MYQYLAVRQL ETGNGNGHSK
ATVQSETSVS EV
|
|---|
| |