| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3909 |
|---|
| Symbol | |
|---|
| ID | 8393259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 4024575 |
|---|
| End bp | 4025105 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644981834 |
|---|
| Product | pentapeptide repeat protein |
|---|
| Protein accession | YP_003139548 |
|---|
| Protein GI | 257061660 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.629243 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGA GAGAATTATT TACTCACTAT CTCAAAAATC AGCGAGATTT TTCCCAAGAG
AAACTACATC AAGCGAACTT AGAAGGACTC AATTTACAAC GGATTAATTT AACCCGTGCT
GATCTCAGTG GGGCTAATTT AAAAGAAACG GACTTAAGTG GAGCCTGTTT AAACCAAGCG
AATTTAACCG ATGCTGATCT CAGTCATTCC CATTTAGTCG GGGCAAATTT AACTGAAATT
AACCTGATTG GAGCCGATTT AAGCGGTGCT AATTTAATGG GGGTTGACTT AACAAAAGCT
GATCTAAGGT GTGCCAATCT GCACAATGCT AACCTATCCT GTGCTCAACT CAAAGAAGTT
AATCTCGATG GGGCTGATCT CAGTGGTGCG AACCTCAGTG GTGCGATGAT TGTTAACACT
GATTTAAGTG TTGCTGATAC CATGGGAGCC TGTTTAGAAG GCAGTCAAGA ATGTCATTTA
GAACAGTCCA TTTCTGCCAC ATCTGCCAAT TGGGTGAGTT GGGCAGGTTA A
|
|---|
| Protein sequence | MQARELFTHY LKNQRDFSQE KLHQANLEGL NLQRINLTRA DLSGANLKET DLSGACLNQA
NLTDADLSHS HLVGANLTEI NLIGADLSGA NLMGVDLTKA DLRCANLHNA NLSCAQLKEV
NLDGADLSGA NLSGAMIVNT DLSVADTMGA CLEGSQECHL EQSISATSAN WVSWAG
|
|---|
| |