Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3878 |
Symbol | |
ID | 8393228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 3987138 |
End bp | 3989285 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644981803 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_003139517 |
Protein GI | 257061629 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.267583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.485697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATTG TTGTTTTAGT CTTAATTCAA ATCTTAACGG TCATTATACT TTCCCGTATT ATGGGATTAG GATGCCGTGC CATTAGGCAA CCATTAGTTA TCGGGGAAAT TGTCGCAGGT ATTATGTTAG GTCCTTCTTT ATTAGGACTA ATTGCACCTG ATTTAATGAC AACAATGTTT CCCCCTGAAA CCTTACCCAT TTTAAATATT TTATCCCAAA TTGGGTTAAT TTTTTTCATG TTCTTGATAG GCTTAGAGCT TAATCCTTCT TACCTAAAAG AACAACTTGA TACTGCCATT TTAACCTCTC ATGTCAGTAT TTTGGTTCCG TTTTCTTTAG GCAGTGTATT AGCTCTCTTA CTCTATCCTT TGGTATCTAA TGACGGGGTT TCATTTACGG CTTTTGCCCT ATTTTTAGGC TCAGCAATGT CCATTACAGC CTTTCCTGTT TTAGCTAGAA TTATTACTGA AAATAACCTA CAAAAAAGCC ATTTAGGAAC CCTTGCTTTA ACCTGTGCAG CCGTTGATGA TGTGACCGCT TGGTGTCTAT TAGCCTTAGC TATTACCGTT ATTAGAACTA ACAGTGTTAT TGGAGCCATT CCCACCATTA TTGAGTCAAT TGTTTACATT ACTTTTATGT TAACAGCCGT TCGATGGCTA TTAGAAAAAC TAGCCATTCA TTATCAACGG ACTCAAAAAC TAAGTCAATT AGTTTTAGCC TTAATTTATA TCGGCGTTGT GGTTTCAGCC TTGATTACTG AATTGATAGG TATTCACCTA ATTTTTGGAG CTTTTCTCTT GGGAGCAGCA ATGCCTAAAG ACCCCAAGCT AGTTAAAGAA ATAGCTGAAA AAACAGAAGA TTTTGTCTTA ATTTTTTTAC TACCTATCTT CTTTGCTTAC AGTGGACTAA GGACGCAAAT TGGCTTACTA AACCGTCCTG AATTATGGCT GTTATGTGCT GCCGTTGTTG CCGTAGCAAT TAGTGGAAAA TACATTGGAA CCTATTATGC AGCGAGATTT TGTGGAGTCA ATAAAAGAGA AGCATCTGCC TTAGGATGGT TGATGAATAC TCGCGGACTG ACTGAATTAA TTGTTTTAAA TATTGGCTTG AGTTTTGGGG TAATTTCTCC CCTATTATTT ACCATGTTAG TCATCATGGC GTTAGTGACA ACCTTTATGA CATCACCTCT GTTAGAATGG ACTTTCCCTA AAGCCAAAAT TCGCCTAGAG GCTTTAGCTG AAGAAGTGCC TAAAGTGGTT GCTCCAAACT ATGGAATTTT AGTTGCCGTT GCTAACCCAA ATACCCAAAA AGGGTTACTA GAAATAGCCA TAATTATTGC CGGAAATGCC TCTTCGATTA TTTATCCCCT CAGTTTAATT CAATTAGATG AAGATTATCT TTATCAGAGT ACCCCAGAAG AAGCTAATCG TCTAATTAAT GAAAAAGAAA AACAACTGAA GCGTTTAGTT AATACCTTAG AACCCGTAGA ATTAAGAGAA ATTGTTCATC CGATTGTTCG TATTGCTAAT GATGTCTCTA AAGAAACGGC TCAAATCGCT GTCAGTGAAC AAATTAACTT AATTATTGTC GGTTGGCATC GTCCCGCTTT TAGTGATAAC CGATTAGGGG GAAGAGTTGG ACAAATTCTC AATACTTCTC CCGTTGATGC AGCAGTATTA GTTGACAAAA ATCTTAAAAA AGTTAAATCC ATTTTAGTTG CCTATGCTGA AAATATTCAT GATGACTTAG CCTTATCTTT GGCATTAAGG ATGCTAGGAA ACGATCCTTC TATTACCCTC AAAGTATTTC GCTTTGCCAG TGCAGAATCT TTGCCAGATA ATGCTTTGAG TTATGAATTT ATGAATATGC TTGATATTTG TCCAACTGAA GTTAAATCGC GTGTTGAGGT TATTTATTTA GAAGATTTAG ATCCCATGAA CAAAGTAATT GAAACTTCAA AAGAAGTAGA TTTAACGATT GCTGGAACCA GTAGAACTTG GGGAATTGAA CGTCAAACAT TAGGAATTTA TACAGATAAA TTAGCAAGAG AATGTCATTC TTCTTTATTA ATTACTCGTC GTTATTCTCC CATGATGAGT CACATGGCTA CCTTTTTGGG AACAAGTAAC CTACAAACCA ATCAATAA
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Protein sequence | MPIVVLVLIQ ILTVIILSRI MGLGCRAIRQ PLVIGEIVAG IMLGPSLLGL IAPDLMTTMF PPETLPILNI LSQIGLIFFM FLIGLELNPS YLKEQLDTAI LTSHVSILVP FSLGSVLALL LYPLVSNDGV SFTAFALFLG SAMSITAFPV LARIITENNL QKSHLGTLAL TCAAVDDVTA WCLLALAITV IRTNSVIGAI PTIIESIVYI TFMLTAVRWL LEKLAIHYQR TQKLSQLVLA LIYIGVVVSA LITELIGIHL IFGAFLLGAA MPKDPKLVKE IAEKTEDFVL IFLLPIFFAY SGLRTQIGLL NRPELWLLCA AVVAVAISGK YIGTYYAARF CGVNKREASA LGWLMNTRGL TELIVLNIGL SFGVISPLLF TMLVIMALVT TFMTSPLLEW TFPKAKIRLE ALAEEVPKVV APNYGILVAV ANPNTQKGLL EIAIIIAGNA SSIIYPLSLI QLDEDYLYQS TPEEANRLIN EKEKQLKRLV NTLEPVELRE IVHPIVRIAN DVSKETAQIA VSEQINLIIV GWHRPAFSDN RLGGRVGQIL NTSPVDAAVL VDKNLKKVKS ILVAYAENIH DDLALSLALR MLGNDPSITL KVFRFASAES LPDNALSYEF MNMLDICPTE VKSRVEVIYL EDLDPMNKVI ETSKEVDLTI AGTSRTWGIE RQTLGIYTDK LARECHSSLL ITRRYSPMMS HMATFLGTSN LQTNQ
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