Gene Cyan8802_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3878 
Symbol 
ID8393228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp3987138 
End bp3989285 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content36% 
IMG OID644981803 
Productsodium/hydrogen exchanger 
Protein accessionYP_003139517 
Protein GI257061629 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.267583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.485697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATTG TTGTTTTAGT CTTAATTCAA ATCTTAACGG TCATTATACT TTCCCGTATT 
ATGGGATTAG GATGCCGTGC CATTAGGCAA CCATTAGTTA TCGGGGAAAT TGTCGCAGGT
ATTATGTTAG GTCCTTCTTT ATTAGGACTA ATTGCACCTG ATTTAATGAC AACAATGTTT
CCCCCTGAAA CCTTACCCAT TTTAAATATT TTATCCCAAA TTGGGTTAAT TTTTTTCATG
TTCTTGATAG GCTTAGAGCT TAATCCTTCT TACCTAAAAG AACAACTTGA TACTGCCATT
TTAACCTCTC ATGTCAGTAT TTTGGTTCCG TTTTCTTTAG GCAGTGTATT AGCTCTCTTA
CTCTATCCTT TGGTATCTAA TGACGGGGTT TCATTTACGG CTTTTGCCCT ATTTTTAGGC
TCAGCAATGT CCATTACAGC CTTTCCTGTT TTAGCTAGAA TTATTACTGA AAATAACCTA
CAAAAAAGCC ATTTAGGAAC CCTTGCTTTA ACCTGTGCAG CCGTTGATGA TGTGACCGCT
TGGTGTCTAT TAGCCTTAGC TATTACCGTT ATTAGAACTA ACAGTGTTAT TGGAGCCATT
CCCACCATTA TTGAGTCAAT TGTTTACATT ACTTTTATGT TAACAGCCGT TCGATGGCTA
TTAGAAAAAC TAGCCATTCA TTATCAACGG ACTCAAAAAC TAAGTCAATT AGTTTTAGCC
TTAATTTATA TCGGCGTTGT GGTTTCAGCC TTGATTACTG AATTGATAGG TATTCACCTA
ATTTTTGGAG CTTTTCTCTT GGGAGCAGCA ATGCCTAAAG ACCCCAAGCT AGTTAAAGAA
ATAGCTGAAA AAACAGAAGA TTTTGTCTTA ATTTTTTTAC TACCTATCTT CTTTGCTTAC
AGTGGACTAA GGACGCAAAT TGGCTTACTA AACCGTCCTG AATTATGGCT GTTATGTGCT
GCCGTTGTTG CCGTAGCAAT TAGTGGAAAA TACATTGGAA CCTATTATGC AGCGAGATTT
TGTGGAGTCA ATAAAAGAGA AGCATCTGCC TTAGGATGGT TGATGAATAC TCGCGGACTG
ACTGAATTAA TTGTTTTAAA TATTGGCTTG AGTTTTGGGG TAATTTCTCC CCTATTATTT
ACCATGTTAG TCATCATGGC GTTAGTGACA ACCTTTATGA CATCACCTCT GTTAGAATGG
ACTTTCCCTA AAGCCAAAAT TCGCCTAGAG GCTTTAGCTG AAGAAGTGCC TAAAGTGGTT
GCTCCAAACT ATGGAATTTT AGTTGCCGTT GCTAACCCAA ATACCCAAAA AGGGTTACTA
GAAATAGCCA TAATTATTGC CGGAAATGCC TCTTCGATTA TTTATCCCCT CAGTTTAATT
CAATTAGATG AAGATTATCT TTATCAGAGT ACCCCAGAAG AAGCTAATCG TCTAATTAAT
GAAAAAGAAA AACAACTGAA GCGTTTAGTT AATACCTTAG AACCCGTAGA ATTAAGAGAA
ATTGTTCATC CGATTGTTCG TATTGCTAAT GATGTCTCTA AAGAAACGGC TCAAATCGCT
GTCAGTGAAC AAATTAACTT AATTATTGTC GGTTGGCATC GTCCCGCTTT TAGTGATAAC
CGATTAGGGG GAAGAGTTGG ACAAATTCTC AATACTTCTC CCGTTGATGC AGCAGTATTA
GTTGACAAAA ATCTTAAAAA AGTTAAATCC ATTTTAGTTG CCTATGCTGA AAATATTCAT
GATGACTTAG CCTTATCTTT GGCATTAAGG ATGCTAGGAA ACGATCCTTC TATTACCCTC
AAAGTATTTC GCTTTGCCAG TGCAGAATCT TTGCCAGATA ATGCTTTGAG TTATGAATTT
ATGAATATGC TTGATATTTG TCCAACTGAA GTTAAATCGC GTGTTGAGGT TATTTATTTA
GAAGATTTAG ATCCCATGAA CAAAGTAATT GAAACTTCAA AAGAAGTAGA TTTAACGATT
GCTGGAACCA GTAGAACTTG GGGAATTGAA CGTCAAACAT TAGGAATTTA TACAGATAAA
TTAGCAAGAG AATGTCATTC TTCTTTATTA ATTACTCGTC GTTATTCTCC CATGATGAGT
CACATGGCTA CCTTTTTGGG AACAAGTAAC CTACAAACCA ATCAATAA
 
Protein sequence
MPIVVLVLIQ ILTVIILSRI MGLGCRAIRQ PLVIGEIVAG IMLGPSLLGL IAPDLMTTMF 
PPETLPILNI LSQIGLIFFM FLIGLELNPS YLKEQLDTAI LTSHVSILVP FSLGSVLALL
LYPLVSNDGV SFTAFALFLG SAMSITAFPV LARIITENNL QKSHLGTLAL TCAAVDDVTA
WCLLALAITV IRTNSVIGAI PTIIESIVYI TFMLTAVRWL LEKLAIHYQR TQKLSQLVLA
LIYIGVVVSA LITELIGIHL IFGAFLLGAA MPKDPKLVKE IAEKTEDFVL IFLLPIFFAY
SGLRTQIGLL NRPELWLLCA AVVAVAISGK YIGTYYAARF CGVNKREASA LGWLMNTRGL
TELIVLNIGL SFGVISPLLF TMLVIMALVT TFMTSPLLEW TFPKAKIRLE ALAEEVPKVV
APNYGILVAV ANPNTQKGLL EIAIIIAGNA SSIIYPLSLI QLDEDYLYQS TPEEANRLIN
EKEKQLKRLV NTLEPVELRE IVHPIVRIAN DVSKETAQIA VSEQINLIIV GWHRPAFSDN
RLGGRVGQIL NTSPVDAAVL VDKNLKKVKS ILVAYAENIH DDLALSLALR MLGNDPSITL
KVFRFASAES LPDNALSYEF MNMLDICPTE VKSRVEVIYL EDLDPMNKVI ETSKEVDLTI
AGTSRTWGIE RQTLGIYTDK LARECHSSLL ITRRYSPMMS HMATFLGTSN LQTNQ