| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3584 |
|---|
| Symbol | |
|---|
| ID | 8392925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 3650422 |
|---|
| End bp | 3650952 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644981515 |
|---|
| Product | fimbrial protein PilA |
|---|
| Protein accession | YP_003139238 |
|---|
| Protein GI | 257061350 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.194411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTC AATTCAAAAC CAAACTCATC CAACACCTCG CTGCTAAAAA AGGAAATAAA
GGTTTCACCT TAATTGAATT ATTGGTTGTT GTTATTATTA TCGGTGTACT GGCTGCGATC
GCTCTCCCCA ACCTCCTCTC TCAAGTGGGT AAAGCCAGAG AATCTGAAGC TAAGTCCTTC
GTCGGTGCAG TTAACCGCGC TCAACAAGGC TACTACACTG AAAATGCTGC TTTTGCTGGC
ACTTTAGGTG ATGTTGAAGT TCCTGCTGGT ACTCCCAAAT ACTACAGTTT CCCCACTACT
TTAGGTACTA GCACGGGTAC TGTTGTTGCC AATGGAACTA ACAACAACAA AAATGGCACA
CGGGATTATG CTGGTGGTAC TCAATATAAC ACTGCTACCC GCGCATTTGA TACCGTTGTT
TGTCGTGGTG ATGTAGGCAG TACCGCAGCA ACCAGTACTC CTGGAGGTGC AGGTGAGGTT
AGCGCGGCGA CTGCTATGAC CTGTGCAACT GGCTTTAAAA TTCTTAAATA A
|
|---|
| Protein sequence | MNAQFKTKLI QHLAAKKGNK GFTLIELLVV VIIIGVLAAI ALPNLLSQVG KARESEAKSF
VGAVNRAQQG YYTENAAFAG TLGDVEVPAG TPKYYSFPTT LGTSTGTVVA NGTNNNKNGT
RDYAGGTQYN TATRAFDTVV CRGDVGSTAA TSTPGGAGEV SAATAMTCAT GFKILK
|
|---|
| |