Gene Cyan8802_3518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3518 
Symbol 
ID8392858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp3583468 
End bp3584364 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content42% 
IMG OID644981452 
ProductABC-2 type transporter 
Protein accessionYP_003139175 
Protein GI257061287 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAA CCATTACACC GTCTCAGTTA GAAAAGGGTT TATCTCCTAG AGAAAGGATT 
TTAACCCCCT TAGATGAAGA AAGCAATCGT TTAGGGGAAT TTATCCAAGA AACCCTAGCC
ATGACAGGTC GCCTGTTTAT TCAATTAAAG CGTCGTCCTT CTACCCTAAT GGCAGGAATT
ATTCAGCCGT TTATGTGGTT AATTTTGTTT GGCGCACTCT TTTATAATGC TCCCCAAGGA
ATGTTCGGAG GAGACTTAAA TTACGCTAAA TTTCTTGCTC CGGGTATTAT CGTTTTTACC
GCTTTTTCAG GGGCATTAAA TGCGGGTTTA CCCGTCATGT TTGACCGAGA ATTTGGCTTT
TTAAATCGCT TATTAGTGGC TCCCTTAGCC TCTCGTTACT CTATTGTCGC CGCGTCCACC
CTCTATATTA TTGCCTTAAG TGTCATTCAA ACCGCAGTGA TTGTCGGCGC AAGTGCTCTA
TTAGGAGCGG GTTTCCCCAA TATTGCTGGA TTAGGGGCGA TCGCTTTGAT TGTCTTTTTA
ATCGTCTTGG GAGTCACCGG ATTAAGTTTA GGATTGGCTT TTGCCTTACC AGGCCATATT
GAATTAATTG CCGTGATTTT TGTGACCAAT TTACCCTTAT TATTTGCCAG TACCGCCCTT
GCACCCTTAT CTTTTATGGC AAAATGGTTA CAGATCGTCG CCAGTCTTAA CCCCTTGACC
TATGCCATTG AACCAATACG TTATATTTAT CTTAAGGGGC ATTGGTCTTT AGGAAGTGTT
GTACTAGACA CCCCTTGGAC GGCTATCAAT TTTGCTTCTG TTTTGTTGAT TTTACTAGCT
TTCGATGTTC TAATATTAGT AGCTATCCAA CCCCTACTAC GTCGCCGTTT TGCTTAA
 
Protein sequence
MSQTITPSQL EKGLSPRERI LTPLDEESNR LGEFIQETLA MTGRLFIQLK RRPSTLMAGI 
IQPFMWLILF GALFYNAPQG MFGGDLNYAK FLAPGIIVFT AFSGALNAGL PVMFDREFGF
LNRLLVAPLA SRYSIVAAST LYIIALSVIQ TAVIVGASAL LGAGFPNIAG LGAIALIVFL
IVLGVTGLSL GLAFALPGHI ELIAVIFVTN LPLLFASTAL APLSFMAKWL QIVASLNPLT
YAIEPIRYIY LKGHWSLGSV VLDTPWTAIN FASVLLILLA FDVLILVAIQ PLLRRRFA