| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3496 |
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| Symbol | |
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| ID | 8392835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 3565900 |
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| End bp | 3567111 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644981431 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_003139155 |
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| Protein GI | 257061267 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00139853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.352296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACTA AAGCTTTCAA ACGTAGTCTA CAACAGTCTG AGAATTACCA TCGCAAAGGA
TTTGGTCAGA CAGAAGCAGC GATGGGGGTG ATGAATACAG AATATCAAAG TTCTCTTATC
CAACAAATTC GTCAAAATAA CTATCAATGG AAACAGGGAA ATGTTACTAT TCATTTAGCA
CAAGCATTTG GATTTTGTTG GGGAGTTGAA CGCGCTGTAG CAATGGCCTA TGAAACCCGT
CAACATTTTC CCAAAGAAAG CATTTGGATT ACTAATGAAC TAATTCATCA TCCTTCTGTG
AATCAACGGC TAGAGCAGAT GGAAATCAAA TTTATTGAAG TAATTAATGG TCAAAAAGAT
TTCTCTCAAA TTAAATCAGG AGATGTGGTT ATTTTACCTG CTTTTGGAGC CAGTGTTAGC
GAAATGCAAC TCCTCAATGA CAGAGGATGT ACGATTGTTG ATACCACTTG TCCTTGGGTT
TCTAAAGTAT GGAACTCAGT AGAGAAACAC AAAAAACGCC ACTATACTTC AATTATTCAT
GGCAAATATC GTCATGAAGA AACCGTAGCT ACCAGTTCTT TTGCAGGGAC TTATTTAGTT
GTATTAAATT TAGAACAAGC GACTTATGTT TGTGATTATA TTCTCAAGGG AGGGAATAAA
GAAGAATTTT TAGCCAAGTT TAAAAATGCT TATTCTGAAG GATTTGATCC TGATACCGAT
CTAGAAAAGG TTGGGATTGC TAATCAAACA ACTATGTTGA AAAGTGAAAC CGAACAAATT
GGAAAACTTT TTGAAGGAAC CATGCTCAAA AAATATGGAC CGGCTGTTAT TAATGACCAT
TTTATGAGTT TTAATACTAT TTGTGATGCT ACCCAAGAAC GTCAAGATGC TATGCTAGAA
TTGGTTAAAG AAAAATTAGA CCTAATGGTA GTTATTGGCG GTTTCAACTC CTCGAATACC
ACTCACCTAC AAGAGATCCC AATTTATCAA GGAATAACCT CTTATCATAT TGATAATGCT
ACTCGGATCA AACCGAATAA TTGCATTGAA CACAAACCCC TAGGGAAAGA CTTAGAAATC
AAAGAAAATT GGCTTCCAGA AGGGTCTATT GTTGTCGGCA TTACATCCGG TGCATCCACT
CCTGATATTA TTGTAGAAGC CGTTATTGAG AAGATTTTTT CCGCCAAAGA ATTAGAGTAT
CAAAGCAATT AA
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| Protein sequence | MDTKAFKRSL QQSENYHRKG FGQTEAAMGV MNTEYQSSLI QQIRQNNYQW KQGNVTIHLA
QAFGFCWGVE RAVAMAYETR QHFPKESIWI TNELIHHPSV NQRLEQMEIK FIEVINGQKD
FSQIKSGDVV ILPAFGASVS EMQLLNDRGC TIVDTTCPWV SKVWNSVEKH KKRHYTSIIH
GKYRHEETVA TSSFAGTYLV VLNLEQATYV CDYILKGGNK EEFLAKFKNA YSEGFDPDTD
LEKVGIANQT TMLKSETEQI GKLFEGTMLK KYGPAVINDH FMSFNTICDA TQERQDAMLE
LVKEKLDLMV VIGGFNSSNT THLQEIPIYQ GITSYHIDNA TRIKPNNCIE HKPLGKDLEI
KENWLPEGSI VVGITSGAST PDIIVEAVIE KIFSAKELEY QSN
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