Gene Cyan8802_3405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3405 
Symbol 
ID8392741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp3475664 
End bp3476860 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content42% 
IMG OID644981342 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_003139068 
Protein GI257061180 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.561638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAAA TCACTATCCT CGGTTCCACT GGGTCTATTG GTACACAAAC CCTCGATATT 
GTCCAGCAAT ACCCTGATCA ATTTCAAGTC GTGGGTTTAG CCACTCGCAA TAATGGGGAA
CTGCTGGCAC AACAAATTAA ACAGTTTCGA CCCGAAATCG TGGCTATTTG TCAGGAAAGC
CAATTAAATA CCATTAAAGA TGCGATCGCA TCCCTAGATT ATTCTCCCAT ATTACTCACG
GGAGAAGCCG GAGTCGTTGA AGTGGCACGC TATGGAGACT CAGAAAGCGT TGTTACAGGA
ATTGTCGGAT GTGCGGGGTT ATTACCGACG ATAGCAGCCA TTGAAGCCGG AAAAGATATT
GCCTTAGCTA ACAAAGAAAC CTTGATTGCC GGGGGGCCTG TCGTATTACC GTTAGTCGAG
AAACATGGGG TTAAATTACT CCCGGCGGAC TCGGAACATT CGGCTATTTT TCAATGCTTA
CAAGGGGTTC CCAAGGGAGG ACTACGCCGT ATTATTTTAA CCGCATCGGG GGGAGCTTTT
CGAGATTGGC CGGTGGAACA ATTAAAGTTT GTTACCGTTG AAGATGCCAT TAAACATCCC
AATTGGTCCA TGGGACGCAA AATAACCGTG GATTCTGCTA CCTTAATGAA TAAGGGATTA
GAAGTCATTG AAGCCCATTA TTTGTTTGGC TTAGAGTACG ATAAAATTGA TATTGTTATC
CATCCTCAAA GTATTATTCA CTCGTTAATT GAATTACAAG ATACTTCCGT TTTAGCGCAA
TTGGGATGGC CAGATATGCG TCTTCCTCTA TTATATGCTT TGTCGTGGCC GGAAAGAATT
TATACTGATT GGGAGCCTTT AGATTTAGTG AAAGCAGGAA GTTTTACCTT CCGAGAACCC
GATCATCATA AATATCCTTG TATGCAATTA GCCTACGCTG CGGGACGGTC TGGGGGTGCT
ATTCCGGCGG TATTAAATGC AGCTAATGAA CAAGCAGTAG CGTTATTTTT AGAAGAAAAA
ATTGCCTTTT TAGAAATTCC TAAATTGATT GAAATGGCTT GCGATCGCTT TACGAATCAA
AATACTTCAA CTCCGACTTT AGAAGATATT TTAGAAGCAG ATCGTTGGGC AAGGCAAGAA
GTCATTAAAG GTTCTCAAGA AATAGCCAAA GGTAATAAAA TTATGTCTCT CACCTAA
 
Protein sequence
MKKITILGST GSIGTQTLDI VQQYPDQFQV VGLATRNNGE LLAQQIKQFR PEIVAICQES 
QLNTIKDAIA SLDYSPILLT GEAGVVEVAR YGDSESVVTG IVGCAGLLPT IAAIEAGKDI
ALANKETLIA GGPVVLPLVE KHGVKLLPAD SEHSAIFQCL QGVPKGGLRR IILTASGGAF
RDWPVEQLKF VTVEDAIKHP NWSMGRKITV DSATLMNKGL EVIEAHYLFG LEYDKIDIVI
HPQSIIHSLI ELQDTSVLAQ LGWPDMRLPL LYALSWPERI YTDWEPLDLV KAGSFTFREP
DHHKYPCMQL AYAAGRSGGA IPAVLNAANE QAVALFLEEK IAFLEIPKLI EMACDRFTNQ
NTSTPTLEDI LEADRWARQE VIKGSQEIAK GNKIMSLT