Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3182 |
Symbol | |
ID | 8392515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 3256529 |
End bp | 3258184 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644981127 |
Product | pseudouridine synthase |
Protein accession | YP_003138856 |
Protein GI | 257060968 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.186572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.110581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAG TAATTCTTGA GAAGATATCA GAATTTGTGA CAGAAAAGAC AGCTTTAAAG GATTTAGCGG TTAATTATTG GTATGAAGGA TATTGTCCCC AAAGTGGTGA ATTTTTAAGA CTTCCCCGTA ATAGAATGAT AGAAGCGATC GCCCTCGGTT TAATGAAACA ATTAGCTGAA GATAATCGCT ATAGTTATGA AGGAAAAATG TATGGTGTTT TATTAGTAGA AACCCCACAA GGAGAACTGG CAGTACTAAA AGCGTTTTCG GGTCTTCTTT TAGGAAAAAA TGTTGTTGAG GGATGGGTTC CTTCTCTATT GGGAAAGGAA AAAATAACTT TAGAAGAAAT TCAAACATTA GAACAACTAG AAAATCTCAA ACATCAGATA GTTGCCTTAC AAAAAATTTC CGAAAGACAG GATTATCAAG ACTTATCTAA AGAATGGAAA ACCCGTTTAA ACAATTTAGC AATTATTCAT CGTGAACGTA AATTAAAAAG ACAAGAAAAA CGCAAAAATT TACTAAAAAC CTTCCAAGAT AATGATTTAA AGCTTGTTTT GGATAATCTC AACAAAGAAA GTCAAAAAGA CGGCATAGAG AAGCGAAAAT TAAAACAAAA AAGAGATAAA ATATTAAACC CATTAAAGCA AAAAATTGAT CAAGCAGATG CTCAAATATT AGAATTAAAA CAACAGCGTA AAGAATTATC CCGTCAGCTT CAAGCACAGA TGAATCAAGT TTATTCTCTA AGCAATTTTG CGGGACAATC AAACTCATTA CAAAGCTTAA TACCCACAGG TGGTTTACTG ACAGGAACGG GAGAGTGTTG TGCGCCAAAA TTACTAAATT ATGCAGCACA ACATCACTTA AAACCTTTAG CTATGGCTGA ATTTTGGTGG GGAGAAGCGT CTAACAATGG AGATAAAATT CCTGGTCAAT TTTATCCTGC GTGTCAGGAA AGATGTCAGC CTTTGATGGG ATTTTTACTG TCTGGATTAG GGAACAATCA ATCTTTTTTT AAAAGTGAAA TCAAGGTAAT TTATGAAGAT CAATGGATAA TTGCTATTGA TAAGCCGAGC GGTTTATTAT CAGTACCAGG TCGTTATTTT GAGACCTTTG ATAGTGTCTT AACCCGCTTA CAAAATAGCT TACCTGATGC TCAAGAATTA AGAACTGTAC ATCGATTAGA TCAAGACACT TCGGGGATTC TTTTATTAGC ACGCGATCGC TACACCCATC GTCACCTTAG TCAACAATTT GCACAACGAA AAGTTGAGAA AATTTATGAA GCAATCTTAG CTGGATCGGT TATGATGAAT GAAGGAGTAA TTCAATTACC TTTATGGGGA GATCCCAATA ATCGTCCTTA CCAAAAAGTT GATTGGGAAC TGGGAAAACC TAGTATTACT CAGTTTAAAG TTATTACAAC ACAAGAAAAC TTGACCCGTA TTCAATTTAT TCCCCTAACA GGACGTACCC ATCAAATCAG GGTTCATGCA GTGGATACAC AAGGACTAGG AAGCGTCATT TTAGGCGATT ATCTTTATGG GTGTAATGCT GGTGTAAGTC GTTTACATTT ACACGCTAGA GAATTAAAAT TTGAGCACCC TCAGCAACAA AAGACTGTTC ATCTTTATTT AGAAACACCA TTTTAA
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Protein sequence | MNQVILEKIS EFVTEKTALK DLAVNYWYEG YCPQSGEFLR LPRNRMIEAI ALGLMKQLAE DNRYSYEGKM YGVLLVETPQ GELAVLKAFS GLLLGKNVVE GWVPSLLGKE KITLEEIQTL EQLENLKHQI VALQKISERQ DYQDLSKEWK TRLNNLAIIH RERKLKRQEK RKNLLKTFQD NDLKLVLDNL NKESQKDGIE KRKLKQKRDK ILNPLKQKID QADAQILELK QQRKELSRQL QAQMNQVYSL SNFAGQSNSL QSLIPTGGLL TGTGECCAPK LLNYAAQHHL KPLAMAEFWW GEASNNGDKI PGQFYPACQE RCQPLMGFLL SGLGNNQSFF KSEIKVIYED QWIIAIDKPS GLLSVPGRYF ETFDSVLTRL QNSLPDAQEL RTVHRLDQDT SGILLLARDR YTHRHLSQQF AQRKVEKIYE AILAGSVMMN EGVIQLPLWG DPNNRPYQKV DWELGKPSIT QFKVITTQEN LTRIQFIPLT GRTHQIRVHA VDTQGLGSVI LGDYLYGCNA GVSRLHLHAR ELKFEHPQQQ KTVHLYLETP F
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