| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3145 |
|---|
| Symbol | |
|---|
| ID | 8392477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 3214506 |
|---|
| End bp | 3215288 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644981089 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_003138819 |
|---|
| Protein GI | 257060931 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00100034 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.534513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTACCA GTCTTAAGAA CCCTTTAGTC AAACAGATTA GACAGTTACA TCGTACTAAG
GGACGGCGCG AACAAAATCT ATTGCTTTTC GAGGGGACTC ACTTGCTAGA GACGGCTTGT
GAGGTCAATT GTTCCCTGGA TTGTCTATGT TATACGGCGC AGTGGCAAAG TCGTTATCCT
CAGTTGTGGG AATTAGCTAC TCAAAAAGCG CAGAGAATTG AGTTAGTATC CCCTGAAGTT
TTACAAGCCT TAGCAACAAC AGTCAACCCT GATGGAGTAA TTGCAACAGC AGTTAATCCT
AAGATAAGTA AACCAACAAT TGCCGATTTT AAAATCGGGT TGATTTTAGA AAGATTACAA
GATCCTGGTA ATTTGGGAAC GATTATTCGG ACGGCTGTTG CTACAGAAAT TGACGGTATT
TGGCTAAGTT CTGATAGTGT AGATATTGAT AACCCAAAGG TGTTAAGAAG TTCGGCAGGT
GCTTGGTTTC ATGTTCCTTT AATAGTCAGT TGTGATCTAT CAGCGACTAT CAAACATTAT
CAAGCATCAG GAGTACAAGT TATCGCTACT TTACCGACAG CTACTAATAC TTATTGGGAC
GTAGATTTAA CCCAACCTAG TTTGATTTTA CTGGGAAATG AAGGAGCAGG GTTATCAGAA
GAATTAGCCA GTTTAGCTGA TCAAACGGTT AGTATTCCCT TGGGGAATAC TATAGAGTCA
TTAAATGTTG CGATCGCTTG TGCGTTATTA CTATATGAAC GACAAAGACA AATGAGGCAA
TAG
|
|---|
| Protein sequence | MITSLKNPLV KQIRQLHRTK GRREQNLLLF EGTHLLETAC EVNCSLDCLC YTAQWQSRYP
QLWELATQKA QRIELVSPEV LQALATTVNP DGVIATAVNP KISKPTIADF KIGLILERLQ
DPGNLGTIIR TAVATEIDGI WLSSDSVDID NPKVLRSSAG AWFHVPLIVS CDLSATIKHY
QASGVQVIAT LPTATNTYWD VDLTQPSLIL LGNEGAGLSE ELASLADQTV SIPLGNTIES
LNVAIACALL LYERQRQMRQ
|
|---|
| |