| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3060 |
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| Symbol | |
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| ID | 8392390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | + |
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| Start bp | 3096382 |
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| End bp | 3097338 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644981009 |
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| Product | RNA polymerase sigma factor SigD |
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| Protein accession | YP_003138741 |
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| Protein GI | 257060853 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.650467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTT CTAAAAGTTC TCCCGATCCT GTCCGCGCTT ATTTACGAGA AATAGGTCGT
GTTCCTCTAC TAACCCACGA AGAAGAAATC CTCTATGCTA AACGAGTACA GCGATTTGTA
GCCTTAGAAA CCCTCAAAGA ATCCTTAACC GAAGAATTGG GACAGGAACC TACCATAGCA
CAATGGGCTA AAGCCGCTAA AATGACTCAA AAAGAACTCC GATCTGCCAT TGAAGCGGGA
GAAGCTGCTA AGCGGAAAAT GGTGGAAGCC AATTTACGTC TGGTAGTCTC CGTCGCTAAA
AAGTATCTGA AGCGGAACCT AGATTTACTC GACTTAATCC AAGAGGGAAC CATTGGGATG
CAGCGAGGGG TAGAAAAGTT TGATCCCACC AAAGGCTATC GCTTTTCGAC CTATGCTTAC
TGGTGGATTC GTCAAGCCAT TACCCGTGCG ATCGCAGAAA AAAGCCGAAC CATTCGCTTA
CCGATCCATA TTACCGAAAA ACTTAATAAA ATCAAGAAAG CCCAGCGACA ACTTTCCCAA
GAAAAAGGAC GCGCTGCTAC CATTGCCGAA TTAGCTGAAG AACTGGAATT AACCCCTAGA
CAAGTACGGG AGTACCTAGA ACGAGCCCGT CAACCCTTGT CTCTTGACTT ACGGGTAGGA
GATAACCAAG ACACCGAATT AGGGGACTTA TTAGAAGATA CCGGCCAGTC TCCTGAAGAT
TATGCCACTC ATTCTTCTTT GCAGTTGGAC TTAGATAGAC TGATGGAAGA GTTGACCCCG
CAGCAGAAGG AAGTGTTAGC CTTAAGATTT GGGTTATCCG ATGGTAAACC CCTAACTTTA
GCTAAAATTG GCAGTATCTT GAATATTAGC CGCGAAAGGG TTAGGCAAAT CGAACGGGAA
GCATTAGCAA AATTGCGAAA ACGAAAGGCC AATATTCGGG AATATTTGGC GAGTTAA
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| Protein sequence | MNVSKSSPDP VRAYLREIGR VPLLTHEEEI LYAKRVQRFV ALETLKESLT EELGQEPTIA
QWAKAAKMTQ KELRSAIEAG EAAKRKMVEA NLRLVVSVAK KYLKRNLDLL DLIQEGTIGM
QRGVEKFDPT KGYRFSTYAY WWIRQAITRA IAEKSRTIRL PIHITEKLNK IKKAQRQLSQ
EKGRAATIAE LAEELELTPR QVREYLERAR QPLSLDLRVG DNQDTELGDL LEDTGQSPED
YATHSSLQLD LDRLMEELTP QQKEVLALRF GLSDGKPLTL AKIGSILNIS RERVRQIERE
ALAKLRKRKA NIREYLAS
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