Gene Cyan8802_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3040 
Symbol 
ID8392370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp3075729 
End bp3076883 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content38% 
IMG OID644980989 
ProductFO synthase subunit 2 
Protein accessionYP_003138721 
Protein GI257060833 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.591688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATTA GTCAAATCAA AGCCATCGAT AGTATTTTGA ATCAGGTTAA ACTAGGACAG 
GATCTATCGT TAGAAGATGG AGTAACCTTG CTGACTCAGA CAGAAGAAAC AGCTATTGCT
GATATTCGTG AAACTGCGGA TAAACTGCGT CAAAAACAGG TAGGAGATAC CGTTACTTAT
ATTATTAATC GTAATATCAA CTTTACTAAT ATTTGCGAAC AACATTGTAA TTTTTGTGCT
TTTCGACGAG ATCCAGGAGA AGAAGGGTCA TTTTGGTTAA CTATTCCCCA AATTGTTGAA
AAAGCTGCTG ATGCTGTGGA AAAAAAAGCG ACTGAAATTT GTATGCAAGG GGGATTAAAT
CCCCAAGCAA AATTAAACGG AACTTCCCTC AATTACTATT TAAAATTAGT TACTACCCTG
AAAACCGAAT TTCCCCAAAT TCATTTACAC GCTTTTTCTC CCCAAGAAGT CGAATTTATT
GCGAGAGAAG ATGGAATTAG CTATGCTGAT GTTATTATGG CTTTACGCGA TGCAGGAGTT
GGTTCTATGC CAGGAACGGC TGCTGAAGTC TTGAATAATC AAGTCAGACG CATTATTTGT
CCTGAAAAAA TCAAGACAGA AACCTGGGTA GAAATTGTTA GTATTGCCCA TCGTTTAGGA
GTTCCTACTA CCAGTACCAT GTTATGTGGT CATATTGAAA CTTCTTGGCA ACGAATTGAA
CATTTATTAC ACTTAAGAAA ACTGCAACAA ACGGCAATAG AAAAAGACTA TCCCGCTAGG
ATTACTGAGT TTATTTTACT TCCTTTTGTC GGACAAGAAG CTCCCCCATC GTTACGCAAA
CGGGTGGCAA GAGAACAACC CAGTTTAGAA GATACTTTGT TATTAACGGC TGTTTCTCGA
CTTTTTTTAG GAAACTGGAT ACCGAATCAT CAACCCAGTT GGGTTAAATT GGGATTAAAT
GGGGCAGTAG AAGCCCTAAA ATGGGGCTGT AATGATATTG GAGGGACTTT AATGGAAGAA
CATATCACCA CCATGGCAGG GGCAAAAGGA GGGACTTGTA TGGCAGTAGA AACATTACAA
CAAGCAATAA AATCGATTAA TCGTCCCTAT CACCAACGAG ATACTATATA TAGCCAGAAA
TTTAGCTATA TATAG
 
Protein sequence
MMISQIKAID SILNQVKLGQ DLSLEDGVTL LTQTEETAIA DIRETADKLR QKQVGDTVTY 
IINRNINFTN ICEQHCNFCA FRRDPGEEGS FWLTIPQIVE KAADAVEKKA TEICMQGGLN
PQAKLNGTSL NYYLKLVTTL KTEFPQIHLH AFSPQEVEFI AREDGISYAD VIMALRDAGV
GSMPGTAAEV LNNQVRRIIC PEKIKTETWV EIVSIAHRLG VPTTSTMLCG HIETSWQRIE
HLLHLRKLQQ TAIEKDYPAR ITEFILLPFV GQEAPPSLRK RVAREQPSLE DTLLLTAVSR
LFLGNWIPNH QPSWVKLGLN GAVEALKWGC NDIGGTLMEE HITTMAGAKG GTCMAVETLQ
QAIKSINRPY HQRDTIYSQK FSYI