Gene Cyan8802_2862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_2862 
Symbol 
ID8392189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp2889796 
End bp2890971 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content42% 
IMG OID644980812 
Producthypothetical protein 
Protein accessionYP_003138547 
Protein GI257060659 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000423917 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000103772 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTAAGCC GTCGTTCTTT TCTGATTAGT ACAAGTATTC TAACCCTAGG ACAGCTATTA 
TCCGGGTGTG GGGATGGACA AACAGCTTTA CGGATTTTCT TACTTCAAGG CTCGATCCCT
CCTCAATTAT TAACAGCTTT TCGCCAAAAG TTGGCTCAAA ATGCCCCTGT TTCCTTTAAA
GTGGAATCCC AATTAAAGGA TCTCTGGAAA CGGTTAGAAA GTTGGCAACA GGGGAGTAAG
GATTCCCAAG GTTTGAAAAA TCTGGTAGGT CAACTTCCTT TAATTAACCC AAACACATCT
GAAAAGGTTG ATTTAGTCAC GTTAGGGGAT GCTTGGTTAT CTCAAGCGAT TCAAGCAGAA
TTAATTGAAC CTTTACCCCT TGAAGTCATC CCAACATGGT CAAAACTGCC GTCTCGTTGG
CAAGGGTTAG TCAAGCGAGA TTCAAAAGGA AATCTGAGTC CACAAGGGCA AATTTGGGGC
GCTCCCTATC GCTGGGGAAC GACTTTAATT GCCTATGATA GTCATCGGTT TGAAAAGTTG
GGATGGACTC CTAAAGATTG GTCGGATTTA TGGCGAGAGG AATTACGCGA TCGCATTGCC
TTAGTTGATC AGCCCAGAGA AGTGATTGGC TTAACCTTAA AAAAACTCGG CTATTCCTAT
AATACTACTG ATTTAAGTCA AGTTTCTTCC TTAACTTCAG AATTGCTGGC GTTACACAAA
CAGGTCAAGT ATTACAGTTC TGATCACTAT TTGCAACCCT TAGTCGTTGG GGATGCGTGG
TTGAGTGTGG GTTGGTCTAG TGATATTATT CCCCTAGTCA ATAGTAATCG TAATATTAAA
GCAGTCGTTC CCGCATCAGG GACGGCTCTT TGGTCTGATG TTTGGGTGAA CCCGAAGGTC
AAACAAGGGG ATACAAAGTT ATCTGAATTA ACGAAACAAT GGCTGGATTT TTGCTGGCAA
GATCAAGCGG TTAATCAAAT TTGTCTGTTA ACCGATGGTG TTTCACCGAT GATTTATCAA
GCGAAAGAAT TACCTTCAGA GGTCAAAGAT AACCCGTTAT TATTCATCGA TCAAAGGATT
ATGGACAAGT GCGATTTCAT TGAACCGTTA CCTTTAAAGG TTAAGCAGGA ATACGAAACA
CTTTGGAAAA CCATGAGAAC CAGCACTAAT GACTAA
 
Protein sequence
MLSRRSFLIS TSILTLGQLL SGCGDGQTAL RIFLLQGSIP PQLLTAFRQK LAQNAPVSFK 
VESQLKDLWK RLESWQQGSK DSQGLKNLVG QLPLINPNTS EKVDLVTLGD AWLSQAIQAE
LIEPLPLEVI PTWSKLPSRW QGLVKRDSKG NLSPQGQIWG APYRWGTTLI AYDSHRFEKL
GWTPKDWSDL WREELRDRIA LVDQPREVIG LTLKKLGYSY NTTDLSQVSS LTSELLALHK
QVKYYSSDHY LQPLVVGDAW LSVGWSSDII PLVNSNRNIK AVVPASGTAL WSDVWVNPKV
KQGDTKLSEL TKQWLDFCWQ DQAVNQICLL TDGVSPMIYQ AKELPSEVKD NPLLFIDQRI
MDKCDFIEPL PLKVKQEYET LWKTMRTSTN D