Gene Cyan8802_2775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_2775 
Symbol 
ID8392102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp2796503 
End bp2799880 
Gene Length3378 bp 
Protein Length1125 aa 
Translation table11 
GC content44% 
IMG OID644980729 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_003138464 
Protein GI257060576 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.74774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.345164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATC CTGACATCCG CGACGGAGCT TATCAATTTT TTATCGAAGA GGCTCCAGAA 
CTCCTAGAAA TTATCGAATC TGGTCTACTG ACCCTCAGAG ACGATCGCAC TAAACCGAAG
GTTCATGAGA TTATGCGAGC GGCTCACTCC CTCAAAGGGG GAGCCGCTAG TGTGGAACTC
GATACCATTA AACTCCTTGC CCATCGTCTA GAGGACATTT TTAAGGCTTT CTATGACGAA
ACCGTGGAAA TTGATCAGGA GTTAGAAACT TGGTTGCTAC ACGCTTATGA CTGTCTTAAA
GACCCTCTGA TGGAACAAAT TGAGACGGGA AGTTTTGATG AAACCTTAGC CTTAGAGAAG
GCTATGCCGA TTTTAGCGAG GATTGAGGAG CGTTTAGGAG ATAGTCTGAC TCAAGGGGAG
CAATATATTC CCTCTAGTGA GGATTTGGGA ATTGATATTG TTTCGTCGAT TTTTGAGGTA
GATGTCGCTC AGGGATTGGA TCATCTTACT AATCTAGTGA CGAATCCCCA AGACTATGAT
CTCGTAGGGG AATTACGCAC CCAAGCGGAG GTATTTCAGG GGTTTGGGGA GTTACTCAAT
TTACCTGGGT TGGGTGCGAT CGCCCAAACA GTATTAACGG CCATTGAAAT CAATGGAGAT
CACGCTTTAA CCATTGCGCA ACTAGCTCTA GGGGATTTTC AAACCAGTTA TCATCAAGTG
CTTCATCAAG GCGATCGCAC TCATGGGGGA CAACCTTCTC CTGAGTTATT AACTTGGACT
CAATTGGAGT CAGTAGAAGC AAACAGCAGT TTCTCTGTAC AGCAGTCAGA AGGGATAGAA
ATTGAGCCGA AAATTGCTCT ACCCAGTCCA GAGATTAAAC GCTTTTCCCT GGATAATTTG
TTTGAAGACA ATGATGAGGA ACAGCTTAAT GAAATGGGTT TTGGTTTCTC AGACTTAGAT
TTCTTAACGT TTGAAGCGGA AAATCAAGGG TCAGAAGCTA TTACGACGAT TCAATCAGAA
CCTTTCGTAG AACCTCATGA ACTTTCTTTC GGTACTCCTG CTTTAGAAGA CGTTTTCAGT
CATGTTATTG ATAGTAGTCT TGAAGAACCC ATCATCAATT CCACAGAACA AGAAGAGTCA
ACGCTTCTCG ACAGTCCTTC TTTAGAGGAT GTCTTTGGGG GAGTTGAACT GATGGAGAGT
TTCGACTCAA CGGTTCTACC ACCGTCTGAA ATCCCAGATT CTAGAGAAGA TCTTGACCAG
ATAGTCCAAT CAGTGGAAGC CATCTTTAAT GAACTTCCTC CCTTAGCTGA AGTTGAAATA
TCTCCCCATT CTCCCCACCC TTCCCACACT CCCCACCCTT CCCACACTCC CCAAACTCCC
CTCCCCCTGT CCTCCTCTTC CCCACCTTCC GAACGCGAAA AAACCCCCTC AAAGGCTAGA
ACTCAGACCC TTAAAGGCAA TCTTTCGGTT AAGGTCGATT TGGATCGTCT GGAACGGATG
AATAATTTAA TTGGGGAATT AGCCATTAAT CGTAATAGTC TATCCCTACA AAATGAGCAA
TTACAAGGGG GAGTTAAAGA ATTACTGCAC CGTTTCCGCT ATTTCCAACA GATGACGGGA
AAATTAAGGG AAGTAGCCGA CGAAATGTTA GTGGCTCCTG AACGCTATAG TGTAGGGGTC
AATGGTCGTT CAAGTCTACG AGCAACGCCA AGAGGGGGTC TAACAACGGA TTTTGACTCC
TTGGAAATGG ATTCCTACGG GGGACTCTAT TCTTTGTTAC AAACGGTTCT GGATGAGATG
GTTCAGCTTG AAGAATCCGT TGATGATATT GTTCTGTTTG CTCGCTCTTC TAATCAAACC
CTTGATCAAC AGGGTCAAAT GCTCACCAAT CTGCGTGATG AGCTAATGTG GGCGAGAATG
TTGCCGTTAT CGGAGGTCTT AAATCGATTT CCACGGATTT TACGCAATCT TTCTAGTAAC
TACCATAAAA AAGTTAAACT GAATCTTCAC GGAACGGGGG TTCTAGTCGA TAAGGCGGCC
TTAGAAAAAC TCTATGATCC CTTACTCCAT CTGTTGCGCA ATGGTTTTGA TCATGGGATT
GAATCCCCAG AAATCCGCCG TCAGTTGGGT AAATCAGAAG TCGGACAAAT CGACATTCGT
GCCTATCACC AAGGAAATCA AACGATTATT GAGATCACCG ATGATGGACG GGGGATTAAT
CTCGATCAAG TCGCTCAAAA AGCGGTTGAA GCGGGATTAA TTCGACCAGA ACAGGTCCAA
ACCATTAGTA AAGAACAATT ACAACATCTG ATTTTTGAAC CAGGATTTTC TACCGCTACC
CAAGTCAGTG AATTGTCGGG ACGGGGAGTG GGATTAGATG TGGTTAGGGA TCAACTGCGT
ACCCTAAAAG GGTCTGTATC GGTGAGTTCA GTATACGGTC AAGGGACAAC GTTTACATTA
CGTCTTCCTC TTACCTTGAC CATCGCTAAA TTGTTGGTCT GTTTGGTGGA ACAAGAAGGA
GGGTCTAAGA CGGCGATCGC TCTTCCGTCT GATAGTATTG AAGAGATTCT CATGCCTGAA
GACGACCAAA TTAAAAAATC AGGCAATGCT CGCTTTTTAC ACTGGCAATC CCAAATTATC
CCCATTTATC CCCTCGGAGA TCTTCTCAAC TATGGTTGTG TCTTTTCTTC AGGGTTTACC
AGTAAAGCTC TTCAAGCGGT TTCTAACCCG GTAGAGTGGG GTTTGCCTCT GTTAATTCTC
CGTCGGGGAC AACAACTTTA TGCACTCGAA GCTAGTCGTC TGGTGACGGA ACAGGAATTG
GTGGTTAAAC CTTTTGGGAG TGCGATCGCA CCACCGTCCT ATACCTACGG TTGTACGATT
TTGGGGGATG GAACCTTAAT TCCAGTGCTT AATGGCAGTA TTTTGATCGA ACAATCCCTC
GATCCTACCC CTAAACGGGA ATCAGGACGG CCACCACTGA CAACTCACGA TTCTTTAGTA
GCCACTCCGA TGATTCTAGT GGTGGATGAT TCGGCTGCTT TACGGCGAAC TTTGGCATTA
ACCTTACAAA AGGCAGGATA TCGGGTATTA CAAGCAAGAG ATGGACGAGA AGCTCTTGAA
CAGTTGCAAC AAAGTTCTGG TATTCAATTG GTTATCTGTG ATGTGGAAAT GCCAAATATG
AACGGGTTTG AGTTTTTGGG TAAACGTCGA GGTTACGACA ATTTGATGCA AATTCCTGTG
GCGATGTTAA CCTCTCGTAG CAGTGAAAAA CATCGTCAAT TAGCGACCCA TTTGGGAGCA
AATGCTTACT TTACTAAGCC TTATATTGAA CAACAATTTT TAGACCAGAT CAAACACCTG
ATTAATATTA ACTATTAA
 
Protein sequence
MINPDIRDGA YQFFIEEAPE LLEIIESGLL TLRDDRTKPK VHEIMRAAHS LKGGAASVEL 
DTIKLLAHRL EDIFKAFYDE TVEIDQELET WLLHAYDCLK DPLMEQIETG SFDETLALEK
AMPILARIEE RLGDSLTQGE QYIPSSEDLG IDIVSSIFEV DVAQGLDHLT NLVTNPQDYD
LVGELRTQAE VFQGFGELLN LPGLGAIAQT VLTAIEINGD HALTIAQLAL GDFQTSYHQV
LHQGDRTHGG QPSPELLTWT QLESVEANSS FSVQQSEGIE IEPKIALPSP EIKRFSLDNL
FEDNDEEQLN EMGFGFSDLD FLTFEAENQG SEAITTIQSE PFVEPHELSF GTPALEDVFS
HVIDSSLEEP IINSTEQEES TLLDSPSLED VFGGVELMES FDSTVLPPSE IPDSREDLDQ
IVQSVEAIFN ELPPLAEVEI SPHSPHPSHT PHPSHTPQTP LPLSSSSPPS EREKTPSKAR
TQTLKGNLSV KVDLDRLERM NNLIGELAIN RNSLSLQNEQ LQGGVKELLH RFRYFQQMTG
KLREVADEML VAPERYSVGV NGRSSLRATP RGGLTTDFDS LEMDSYGGLY SLLQTVLDEM
VQLEESVDDI VLFARSSNQT LDQQGQMLTN LRDELMWARM LPLSEVLNRF PRILRNLSSN
YHKKVKLNLH GTGVLVDKAA LEKLYDPLLH LLRNGFDHGI ESPEIRRQLG KSEVGQIDIR
AYHQGNQTII EITDDGRGIN LDQVAQKAVE AGLIRPEQVQ TISKEQLQHL IFEPGFSTAT
QVSELSGRGV GLDVVRDQLR TLKGSVSVSS VYGQGTTFTL RLPLTLTIAK LLVCLVEQEG
GSKTAIALPS DSIEEILMPE DDQIKKSGNA RFLHWQSQII PIYPLGDLLN YGCVFSSGFT
SKALQAVSNP VEWGLPLLIL RRGQQLYALE ASRLVTEQEL VVKPFGSAIA PPSYTYGCTI
LGDGTLIPVL NGSILIEQSL DPTPKRESGR PPLTTHDSLV ATPMILVVDD SAALRRTLAL
TLQKAGYRVL QARDGREALE QLQQSSGIQL VICDVEMPNM NGFEFLGKRR GYDNLMQIPV
AMLTSRSSEK HRQLATHLGA NAYFTKPYIE QQFLDQIKHL ININY