| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_2347 |
|---|
| Symbol | |
|---|
| ID | 8391667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 2357665 |
|---|
| End bp | 2359104 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644980316 |
|---|
| Product | bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein |
|---|
| Protein accession | YP_003138058 |
|---|
| Protein GI | 257060170 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase
[TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.159703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTT TTGAGAAATT GACCCAAGCC ATAACCTATC ATGAAACGTT ATTGGTTGTT
GGACTTGATC CTAATCCAGA AATGATGCTC CAATACCATT ATAACGACTG CTCACCAGAC
TCTTTGAAAA AACAGTGGTC AACTTGGCTT AAATCGATTA TTAGCGAGAC GATGGGATCA
GTTTGTGCCT ATAAACCCAC CTTGGGATTT TACCAAGTAT TAGGAGCGTT AGGGTTAGAA
TTACTGTCTG AAATTATCGC AGAAATTCCC CCAGATATTC CGATTATTTT AGATGCAAAA
CACGGGGATC TTAATACCAG TACGATTTTT GCTAAGGCAA TTTTTGAACA GTGGAAAGTG
GATGCAGTCA CGGTTAGTCC CTATAGTGGC CATGATCAGG TTGCTCCTTT TTTAGTTTAT
CCTGATAAGG GTGTTTTTGT GCTGTGTCAT TCTTCTAATC CCGGGGCGAT CGCTTTACAG
GAATACCCGA CTCCTGAAAC GCCTTTTTAT CTACAGGTGG TTAAAGAAGC GAAAATGTGG
GGAACAATAG AACAAGTTTT ATTAGAAGTC GGAACGACTG ATGTAGAGGT GATTAAAAAA
ATTCGCTCAA TTGCACCTGA AAGATTTATT TTAATGCGAA GTATTTGGTC ACAAAAAAAT
CAACTTGAAA CCATTTTAAC GGCAGGTTTA AATAGCAATG GGGATGGGTT ATTGATTCCG
ATTCCTCAAG ATTTTTTAAA GGCAGACCAT TTAAAAGAAC AGGTTAAAAC TCTAAATCAA
GAGATTAATC GAACTCGAAA TCAAATTATG AGTCAACAGA ATAGTTGTCA ATTGTGGACT
TCTGATGTCT GTTTATTTAA TCCCCATCCC TATCAAGATT TGATTTTGCA ATTATATGAT
ATTGGTTGTT TGCTATTTGG GGAATATGTG CAAGCATCGG GAGCAACTTT TTCCTATTAT
ATTGATCTGA GGCAAATTAT TTCTAATCCT CAGATTTTCC ATCAAGTATT AAGAGCTTAT
GCTGATATTC TTGACCAATT AGAATTTGAT CGCATTGCGG GTATTCCCTA TGGTTCTTTA
CCGACAGCAA CAGGGTTATC TTTGATGTTA CATCATCCGA TGATTTATCC TCGTAAAGAA
ATTAAAGCTC ATGGAACTCG TCGCTTAATT GAAGGGGAGT TTAACCCCGG AGAAAAAGTT
GTTTTGATTG ATGATATTTT AATTACGGGT AAAAGTGTAA TAGAAGGAGC GGAAAAATTA
CAATCTTCTG GATTAATTGT CAAAGATATT GTGGTTTTTA TTGACCATGA AGAAAATGTT
AAAGATAAGA TTGAAAGTTA TGGTTATACA GCCTATTCTG TGTTAAAAAT TTCTGAAATT
ACAGAGACTT TATATGCAGC AGGACGCATT AATCAGGAGC AATATCAGCG TTTATCTTAA
|
|---|
| Protein sequence | MSFFEKLTQA ITYHETLLVV GLDPNPEMML QYHYNDCSPD SLKKQWSTWL KSIISETMGS
VCAYKPTLGF YQVLGALGLE LLSEIIAEIP PDIPIILDAK HGDLNTSTIF AKAIFEQWKV
DAVTVSPYSG HDQVAPFLVY PDKGVFVLCH SSNPGAIALQ EYPTPETPFY LQVVKEAKMW
GTIEQVLLEV GTTDVEVIKK IRSIAPERFI LMRSIWSQKN QLETILTAGL NSNGDGLLIP
IPQDFLKADH LKEQVKTLNQ EINRTRNQIM SQQNSCQLWT SDVCLFNPHP YQDLILQLYD
IGCLLFGEYV QASGATFSYY IDLRQIISNP QIFHQVLRAY ADILDQLEFD RIAGIPYGSL
PTATGLSLML HHPMIYPRKE IKAHGTRRLI EGEFNPGEKV VLIDDILITG KSVIEGAEKL
QSSGLIVKDI VVFIDHEENV KDKIESYGYT AYSVLKISEI TETLYAAGRI NQEQYQRLS
|
|---|
| |