| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_2231 |
|---|
| Symbol | smpB |
|---|
| ID | 8391550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 2247895 |
|---|
| End bp | 2248362 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644980203 |
|---|
| Product | SsrA-binding protein |
|---|
| Protein accession | YP_003137946 |
|---|
| Protein GI | 257060058 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0691] tmRNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.589723 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAATG AAACTAAACC GATCAAAATT GTCAGTGATA ACCGCCAAGC TCGTTTTCTC
TATGAAATTT TAGAGACTTA TGAGGCAGGT ATTGCTTTAG TGGGAACTGA GGTTAAATCT
GTTCGTGCAG GTAAAGTTAA CCTTGGGGAT GGCTATGTTT TAATTCGCCA TGGGGAAGCC
ATCCTACTGA ATGTTCATAT TTCTCCCTAT GAGGCGAGTG GAGCCTATTT TAATCATGAT
CCTCGCCGCA GTCGCAAATT GTTGTTACAT CGCAAAGAAA TTAATAAATT AATTGGACAA
ATTGAACAAA AAGGATTAAC CGTGGTTCCC TTAAAAATGT ATCTTAAAGG AAGTTTAGTA
AAGGTGAGTC TGGGACTCGC TAGAGGGAAG AAATTGCATG ATAAACGGGA AACCATCAAA
CGTCGTCAAG ATGAGCGTGA AATGTCCCGC GCGATGAAAC AGTATTAA
|
|---|
| Protein sequence | MGNETKPIKI VSDNRQARFL YEILETYEAG IALVGTEVKS VRAGKVNLGD GYVLIRHGEA
ILLNVHISPY EASGAYFNHD PRRSRKLLLH RKEINKLIGQ IEQKGLTVVP LKMYLKGSLV
KVSLGLARGK KLHDKRETIK RRQDEREMSR AMKQY
|
|---|
| |