Gene Cyan8802_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1994 
Symbol 
ID8391310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp2014295 
End bp2015512 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content40% 
IMG OID644979975 
Productprotein of unknown function DUF214 
Protein accessionYP_003137720 
Protein GI257059832 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0259708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTC TAGAAAGTTT CAAAATGGCA ACGGCAATGT TAGCCGCAAA TAAATTGCGG 
ACTAGCTTAA CTATGTTGGG TATTGTCATT GGTAATGCTT CGGTTATTGC GACCATTGGG
ATTGGACAAG GAACCCAAAA ACTGGCTAAT CAACAATTAG AGACGTTAGG TCCTAATATA
CTGTTTGTCA TGCCTGGAAA CCAGCAAGGT CGCCGAACGA CGCTAAATCT TCCTAAAACT
TTAGTGTTAG AAGATGCAAA AGCGATCGCA TCTCAAGTTC CTAGTATTAA ACAAGTTGCC
CCAGAAATCA ACCAAAGACA ATTAATTTCT TACGGGAATC AAAAGACTAA CGCTACCCTA
AGTGGGACAA CGCCTGAATT TTCATCGGTG CGGAATTTTC AGATAGCCAC AGGACGATTT
ATTAATGAAA TTGATCTCAA ACGGAATAAA CGAGTAGCCG TTATTGGGTC AGAAGTTTCT
AATACTTTAT TCAAAAGACG TAGTGCCATT GGTGAACAAA TCCGCATAAA AAATATTGGT
TTTCAAGTAA TAGGCGTTCT AGAACCCAAA GGGTCTTTTT TTGGAACCAA TCAAGACGAA
ACGGTTTTAA TTCCTCTAAC AACAATGGCT TATCAAATTG TTGGACGCAC TTCTCCCTAT
GGAGTTCAAT TAAGTGTGAT TCATATCGAA GCAAAAGATA CTGATAGTGT TCGCGCCGCT
AAATTCCAAA TTGAGAACCT TTTGCGCTTA AGACATAATA TTACCAACGA GGATGATTTC
GGCGTACAAA CCTCTAAACA AATGTTGAGT ATTGTGGGTA ATGTCACTTC AGCTTTAACC
CTCATGTTAG TTGCTATTGC CGGAATTTCT TTGATTGTTG GGGGAATTGG TGTCATGAAT
ATTATGTTAG TTTCAGTGAG TGAACGCACT CAAGAAATTG GACTGAGAAA AGCGTTAGGG
GCAACCCAAA GTGATATTTT AATTCAGTTT TTAATTGAAG CGGTTATTAT TTCCCTATCG
GGGGGAATTA TTGGGATTCT TTCTGGTGTT AGTATTATGG CATTAGTCGG ATTAATTACT
CCTTTATCCC CGGTTGTTTC TTCGGGTGCT ATTCTCCTCT CTTTAGGGAT TTCTGGAGGG
GTTGGTTTAG GGTTTGGGGT ATTACCTGCC CGACGCGCTG CTAAACTTGA TCCTATTGTG
GCATTAAGAA GCACTTAG
 
Protein sequence
MNFLESFKMA TAMLAANKLR TSLTMLGIVI GNASVIATIG IGQGTQKLAN QQLETLGPNI 
LFVMPGNQQG RRTTLNLPKT LVLEDAKAIA SQVPSIKQVA PEINQRQLIS YGNQKTNATL
SGTTPEFSSV RNFQIATGRF INEIDLKRNK RVAVIGSEVS NTLFKRRSAI GEQIRIKNIG
FQVIGVLEPK GSFFGTNQDE TVLIPLTTMA YQIVGRTSPY GVQLSVIHIE AKDTDSVRAA
KFQIENLLRL RHNITNEDDF GVQTSKQMLS IVGNVTSALT LMLVAIAGIS LIVGGIGVMN
IMLVSVSERT QEIGLRKALG ATQSDILIQF LIEAVIISLS GGIIGILSGV SIMALVGLIT
PLSPVVSSGA ILLSLGISGG VGLGFGVLPA RRAAKLDPIV ALRST