Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1847 |
Symbol | aspS |
ID | 8391162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 1871603 |
End bp | 1873483 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644979834 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_003137580 |
Protein GI | 257059692 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCAATG CGCCTCATGA TTGGCTGAAC CCATCAAAAG CGTGTTACAT TTTGTATTAT GACAGAAATC TTAGATTAAT TTCGATGCGA ACTCACTACT GCGGCGACTT ACGAGCAACT GACATTGAAC AAACCGTCAC CCTATTTGGT TGGGTCGATC GCCGACGGGA TCATGGAGGA GTCATTTTCA TTGACCTACG CGATCGCACC GGAATTGTGC AGATCGTCAG TGACCCCCAA AGAACCCCCG ACTCCTACCC CGACGCAGAA ACGCTACGGA ATGAGTATGT AGTCAAAATC GTCGGTCGTG TTAGTCAGCG TCCCCCAGAG TCTTTAAACC CCAAAATTCC CACCGGAGAA GTGGAAATTT ACGCCAACAG CATCGAATTA CTCAATGGGG TTAACAAACA ATTACCCTTC GTTATCTCCA GTTTAGAAGC GGAATTAGTC AGAGAAGATG TCCGTCTGAA GTATCGCTAT TTAGACTTAA GACGCGATCG CATGGCCAAA AACCTGCAAT TGCGTCACGC TGTGGTTAAA GCCATGCGAC GCTATCTTGA AGACGAACAG CAATTTATGG AGATAGAGAC CCCTATTTTA ACCCGTTCTA CTCCAGAAGG CGCGAGGGAT TATTTAGTGC CTTCCCGTGC TAATCCGGGT CAATGGTATG CCTTACCCCA GTCACCCCAA TTATTCAAGC AATTATTAAT GGTAGCTGGC TGCGATCGCT ACTATCAGAT CGCTCGTTGT TTCCGTGATG AAGATTTACG CGCGGATCGA CAACCGGAAT TTACCCAATT AGACATGGAA ATGAGTTTCA TGTCAGAGGA AGAAATTTTA AGTCTAAATG AAGGATTAGT CTGTCATATC TTCAAAAGTG TCAAAAACCT TGATATCCCT CGTCCGTTTC CTCGTTTAAC CTATGCAAAA GCGATGGAAA AATATGGCAA TGATCGCCCT GATACTCGCT TTGGTTTAGA GTTAGTCGAT GTTTCCGATA TTGTTAAAGA TAGCGGGTTT AAAGTCTTTT CAGAAGCGGT AAAAACGGGA GGGAAAGTGA AAATTTTGCC CGTTCCTGGG GGCAATGAAA CGATATCTAA TGTTCGCATT AAACCAGGAG GAGATTTATT TAGAGAAGCA ACGGAAGCAG GAGCAAAAGG TATTGCTTAT ATTCGGGTAA AAGAAGACAA TAAACTCGAT ACAATTGGAG CAATTAAAGA TAACTTGACC GAAGACCAAA AGCTAGAATT ATTAGCCAGA ACGGGAGCAA AATCAGGAGA TTTATTGTTA TTCGGTGCAG GAGATACGGA TACCGTTAAT AAATCTTTGT CTCGGTTACG GTTAGTCATT GGAGAACAAT TAGGATTAAT TGATCCTGAG AAGATTAATT TACTTTGGAT CACGGAATTT CCTATGTTTG AATGGAATGC AGATGAAAAA AGATTAGAAG CATTACATCA TCCCTTTACT GCACCTAACC CCGAAGATTT AGATGATTTG AAAACTGCCA GAGCCCAAGC TTATGATTTA GTTTACAACG GGGTAGAAGT CGGAGGAGGA AGTCTTCGTA TTTATCAAAA AGATGTGCAA GAAAAAGTCT TTGCTACCAT TGGATTATCC ATGGAGGAAG CTTACAATAA ATTTGGCTTT TTGTTAGAAG CATTTGAATA CGGAACTCCT CCCCACGGGG GTATTGCCTA CGGGTTAGAT AGGTTAGTCA TGTTATTAGC AGGGGAAGAT TCTATTAGGG ATGTCATTGC CTTTCCTAAG ACACAACAAG CGAGTTGTTT ACTCACAGAA GCACCCGCGA CTGTTGATGA AAAACAGTTA AAAGAATTAC AGGTTAAATC AACTTATAAA CCTAAAACTA AAGAGGAGTA A
|
Protein sequence | MGNAPHDWLN PSKACYILYY DRNLRLISMR THYCGDLRAT DIEQTVTLFG WVDRRRDHGG VIFIDLRDRT GIVQIVSDPQ RTPDSYPDAE TLRNEYVVKI VGRVSQRPPE SLNPKIPTGE VEIYANSIEL LNGVNKQLPF VISSLEAELV REDVRLKYRY LDLRRDRMAK NLQLRHAVVK AMRRYLEDEQ QFMEIETPIL TRSTPEGARD YLVPSRANPG QWYALPQSPQ LFKQLLMVAG CDRYYQIARC FRDEDLRADR QPEFTQLDME MSFMSEEEIL SLNEGLVCHI FKSVKNLDIP RPFPRLTYAK AMEKYGNDRP DTRFGLELVD VSDIVKDSGF KVFSEAVKTG GKVKILPVPG GNETISNVRI KPGGDLFREA TEAGAKGIAY IRVKEDNKLD TIGAIKDNLT EDQKLELLAR TGAKSGDLLL FGAGDTDTVN KSLSRLRLVI GEQLGLIDPE KINLLWITEF PMFEWNADEK RLEALHHPFT APNPEDLDDL KTARAQAYDL VYNGVEVGGG SLRIYQKDVQ EKVFATIGLS MEEAYNKFGF LLEAFEYGTP PHGGIAYGLD RLVMLLAGED SIRDVIAFPK TQQASCLLTE APATVDEKQL KELQVKSTYK PKTKEE
|
| |