Gene Cyan8802_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1562 
Symbol 
ID8390874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1602758 
End bp1604833 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content51% 
IMG OID644979557 
Productelongation factor G 
Protein accessionYP_003137307 
Protein GI257059419 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00484] translation elongation factor EF-G
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00909597 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGTA CTATCCCACT GGAGAGGGTA CGAAATATCG GCATCGCAGC ACATATTGAT 
GCGGGTAAGA CAACAACAAC CGAACGAATC CTCTTCTATA CAGGAATCGC CCATAAACTT
GGAGAAGTCC ATGAAGGTAC TGCCACCATG GACTGGATGG CTCAAGAGCA GGAACGGGGA
ATTACCATCA CGGCTGCGGC CATCAGTACC AGTTGGCTTG ACCATCGCAT TAACATCATC
GACACCCCCG GTCACGTTGA CTTCACCATC GAAGTTGAAC GGTCTATGCG GGTATTAGAT
GGGGTCATTG CCGTATTTTG TTCCGTGGGA GGTGTTCAGC CCCAATCTGA AACCGTCTGG
CGACAGGCCG ATCGCTATGA AGTCCCTCGC ATTGCCTTTG TTAACAAAAT GGATCGCACT
GGAGCGAACT TTGATCGGGT ACACGAACAG ATCCGCGATC GCCTGAGAGC CAATGCTGTG
CCGATTCAAA TCCCCATTGG CAGCGAAAGC GACTTCCATG GCATCGTGGA CTTAGTCCGA
ATGCGGGCGA AAATCTATCA AGACGATCTC GGCGAAAAGA TCGAAGAAAC AGAGGTTCCC
GAAGACCTCT TAGAACAAGC CCTCGACTAT CGGTCTAAAC TCATTGAAGC CGTAGCCGAA
TATAACGAAG ATCTCTTAGA AAAATATTTA GAAGGCGAAG ACTTAAGCGA AGCCGAGATT
AAACAGGGAC TGCGCCAAGC AACCGTTAAT CGGGCGATCG TCCCTTTATT GTGTGGTTCG
GCCTTCAAAA ACAAAGGCGT GCAATTGCTG CTCGATGCGG TAGTCGATTA CTTGCCCTCT
CCCTTAGAAG TCCCCCCCAT TAAAGGATTA TTGCCCGATG GCAGCGAAGA AGTGAGAAAA
GCCTCCGATG AGGAACCCTT CTCCGCCTTA GCCTTTAAAA TCGCCTCTGA TCCCTTTGGA
CGTTTGACCT TTATCCGAGT CTATTCAGGG GTCTTGCAAA AGGGCAGTTA TGTTTATAAC
TCCACCAAAA ATACCAAAGA ACGGCTCGCG AGGCTGATCG TCCTCAAATC GAACGATCGC
ATCGAAGTCG ATGAACTGCG AGCCGGAGAT CTTGGGGCAA CCATTGGGCT AAAAAACACC
ACCACCGGGG ACACTCTGTG TGACGACAGT CAACCGATTA TCCTCGAATC CCTGTTTGTT
CCAGAACCCG TTATTTCCGT CGCCGTAGAG CCCAAAACCA AACAGGATAT GGAGAAACTC
TCCAAAGCCC TACAAGCCCT CTCTGACGAA GATCCCACCT TCCGCGTTAG TATCAACCCC
GAAACCAATC AAACCGTGAT CGCGGGGATG GGAGAACTGC ACCTAGAGAT TCTCGTTGAT
CGGATGCTAC GGGAATATAA AGTAGAAGCT AGCGTCGGGA AACCCCAAGT CGCCTACCGC
GAAACCATTC GTAAGTCCTG TGATGCGGAA GGAAAATATA TCCGCCAAAG TGGCGGTAAA
GGGCAATACG GCCACGTTGT GATCCACCTA GAGCCAGGAG ATCCTGGCAG TGGCTTCGAG
TTTGTTTCTA AAATCGTTGG GGGGGTGATT CCCAAAGAAT ACATTGCCCC CGTCGAACAA
GGGATCAAAG AATGCTGCGA ATCCGGTGTG ATCGCAGGTT ATCCCGTCAT TGATGTGAAA
GTCACCCTAC TCGATGGCTC CTATCATGAT GTGGATTCTT CAGAAATGGC CTTTAAAATT
GCGGGGTCGA TGGCCTTACG CAATGCGGTC ACCAACGCCT CCCCCGTGGT GTTAGAACCG
ATGATGAAAG TTGAGGTGGA AGTCCCCGAA GATTTCCTAG GGGATGTTAT TGGGGATCTC
AACGCCCGTC GGGGCAACAT CGAAGGGATG GTGTCTGAAG ACGGTCTTGC CAAAGTTTCT
GCAAAGGTTC CTCTGGCAGA AATGTTTGGC TACGCGACCG ATATCCGGTC AAAAACCCAA
GGCCGGGGGA TCTTCTCCAT GGAATTTAGC CATTATGCAG AAGTCCCCCG CAATGTCGCC
GAAGCGATTA TCGCTAAAAA CACAGGGAAC GCTTAA
 
Protein sequence
MARTIPLERV RNIGIAAHID AGKTTTTERI LFYTGIAHKL GEVHEGTATM DWMAQEQERG 
ITITAAAIST SWLDHRINII DTPGHVDFTI EVERSMRVLD GVIAVFCSVG GVQPQSETVW
RQADRYEVPR IAFVNKMDRT GANFDRVHEQ IRDRLRANAV PIQIPIGSES DFHGIVDLVR
MRAKIYQDDL GEKIEETEVP EDLLEQALDY RSKLIEAVAE YNEDLLEKYL EGEDLSEAEI
KQGLRQATVN RAIVPLLCGS AFKNKGVQLL LDAVVDYLPS PLEVPPIKGL LPDGSEEVRK
ASDEEPFSAL AFKIASDPFG RLTFIRVYSG VLQKGSYVYN STKNTKERLA RLIVLKSNDR
IEVDELRAGD LGATIGLKNT TTGDTLCDDS QPIILESLFV PEPVISVAVE PKTKQDMEKL
SKALQALSDE DPTFRVSINP ETNQTVIAGM GELHLEILVD RMLREYKVEA SVGKPQVAYR
ETIRKSCDAE GKYIRQSGGK GQYGHVVIHL EPGDPGSGFE FVSKIVGGVI PKEYIAPVEQ
GIKECCESGV IAGYPVIDVK VTLLDGSYHD VDSSEMAFKI AGSMALRNAV TNASPVVLEP
MMKVEVEVPE DFLGDVIGDL NARRGNIEGM VSEDGLAKVS AKVPLAEMFG YATDIRSKTQ
GRGIFSMEFS HYAEVPRNVA EAIIAKNTGN A