Gene Cyan8802_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1561 
Symbol 
ID8390873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1601389 
End bp1602618 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content49% 
IMG OID644979556 
Productelongation factor Tu 
Protein accessionYP_003137306 
Protein GI257059418 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.052718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG CAAAATTTGA ACGGACAAAA CCTCACGTTA ACATCGGGAC CATCGGTCAC 
GTTGACCACG GGAAAACTAC CTTGACGGCA GCTATTACCA TGACCTTAGC TGCTCAGGGT
AAAGCCAAAG CTCGTAACTA CGAAGACATT GATGCGGCTC CCGAAGAAAA AGCACGGGGG
ATTACCATCA ATACCGCTCA CGTTGAATAC GAAACCGATA GCCGTCACTA CGCCCACGTA
GACTGCCCTG GACACGCTGA CTACGTTAAG AACATGATCA CCGGAGCAGC CCAAATGGAC
GGCGGTATCT TAGTGGTATC GGCTGCCGAT GGCCCCATGC CCCAAACCCG TGAACATATT
CTGTTGGCTA AACAGGTTGG GGTTCCTAAT CTGGTGGTCT TCCTCAACAA GCAAGATATG
GTCGATGACG AAGAACTGTT AGAACTCGTT GAACTTGAAG TTCGTGAACT GCTCACTGAG
TATGGGTTTG ATGGAGACAA TATTCCCATT GTGGCTGGTT CAGCCCTGCA AGCGGTAGAA
GCCCTCAAAG CCAATCCTAA AATTGCCAAA GGGGATAATG AATGGACTGA TAAAATCCTT
GCCCTGATGG ATGAAGTGGA TGCTTATATC CCTGAACCCG AACGGGAAAT CGATAAGCCC
TTTTTGATGG CAGTAGAAGA CGTTTTCTCT ATCTCTGGTC GGGGAACCGT TGCTACTGGA
CGGATTGAAC GGGGTAAAGT CAAAGTGGGC GAAACCGTCG AAATCGTCGG TATTCGTGCT
ACCAGCAGCA CCACCGTTAC CGGGGTAGAA ATGTTCCAAA AAACCCTCGA AGAAGGACTC
GCCGGGGACA ACGTGGGACT GCTCCTACGG GGGGTTAAAA AGGAAGATAT TGAACGGGGA
ATGGTTATTG CTAAACCGGG TTCAATCACT CCTCACACCC AGTTTGAAGG GGAAGTGTAT
GTGCTGACCA AAGAAGAAGG GGGTCGTCAT ACTCCTTTCT TCAAGAACTA TAAACCTCAG
TTCTATGTCC GTACCACCGA TGTAACCGGA AGTATTGTTG ACTATACGTC TGATGAAGGG
GAAACCGTGG AAATGGTTAT GCCTGGCGAC CGGATTAAAA TGACCGTGGA ATTGATTAAC
CCCATTGCGA TTGAGCAAGG AATGCGCTTT GCGATTCGTG AAGGTGGCCG TACCATCGGT
GCGGGTGTTG TCTCGAAGAT TCTGAAGTAG
 
Protein sequence
MARAKFERTK PHVNIGTIGH VDHGKTTLTA AITMTLAAQG KAKARNYEDI DAAPEEKARG 
ITINTAHVEY ETDSRHYAHV DCPGHADYVK NMITGAAQMD GGILVVSAAD GPMPQTREHI
LLAKQVGVPN LVVFLNKQDM VDDEELLELV ELEVRELLTE YGFDGDNIPI VAGSALQAVE
ALKANPKIAK GDNEWTDKIL ALMDEVDAYI PEPEREIDKP FLMAVEDVFS ISGRGTVATG
RIERGKVKVG ETVEIVGIRA TSSTTVTGVE MFQKTLEEGL AGDNVGLLLR GVKKEDIERG
MVIAKPGSIT PHTQFEGEVY VLTKEEGGRH TPFFKNYKPQ FYVRTTDVTG SIVDYTSDEG
ETVEMVMPGD RIKMTVELIN PIAIEQGMRF AIREGGRTIG AGVVSKILK