Gene Cyan8802_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1542 
Symbol 
ID8390854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1580390 
End bp1581217 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content34% 
IMG OID644979539 
Producthypothetical protein 
Protein accessionYP_003137289 
Protein GI257059401 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.966764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0160527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGACA ATATTTGTAA GTTTATTGCT GAAACCTATT CTAGAGATTT AGCCCAATGG 
TTATTAGGAA AACCCATAGA ATTAACTATC TTAGAACCCA CAGAATTACA AGTTGATCCT
ATTCGAGTTG ATAGTCTTAT TTTTCTTGAG TCAGAAGACT TGATTTTGCA TATTGAGTTC
CAAACGAGTC CTCAAGAAGA TGTCCCTTTT AGAATGGCTG ATTATCGCTT AAGAATTTAT
CGCCGTTTTT CTAATAAATC GGTTTATCAA GTAGTAATTT ATCTCAAAAA AACAAATTCA
GAATTAGTTA AAATTGATCG GTTTAACTTA CCTGAATTAC AGCATCAATA TAATGTTATT
CGACTTTGGG AAATTCCGAC AGAACAGTTA TTAACCTCAT CGGGTTTACT TCCCTTTGCT
GCGTTGTCTC AAACCGAAAA CCCTGTTAAT GTATTGCAAC AAGTCGCTAG GCGAATTGAA
GCAATTAGTG ATAGAATTGA GAAAAGCAAT GTAACCGCTA CAACAGCCAT ACTAGCGAGT
TTAGTTTTAG ATAAAATGGT TATTAAAAGG TTATTGAGAG ATGACATTAT GAAAGAATCA
GCAATTTATC AGGAAATACA AGCGATCGGT GAAGCTAAAG GGAGACAGCA AGGAGAAACA
AAATTAGTTC TTCGACTACT TAACCGACGA ATTGGGGAAA TAACCCAAAA TTTAGAGGAA
AATATCCGAG AATTATCCGT TGAACAACTA GAAAATCTGG GGGAAGCTTT GTTAGACTTT
AATAGTCAGT CTGACTTAAT TAATTGGTTA AATTCTGAAA ATAAATAA
 
Protein sequence
MYDNICKFIA ETYSRDLAQW LLGKPIELTI LEPTELQVDP IRVDSLIFLE SEDLILHIEF 
QTSPQEDVPF RMADYRLRIY RRFSNKSVYQ VVIYLKKTNS ELVKIDRFNL PELQHQYNVI
RLWEIPTEQL LTSSGLLPFA ALSQTENPVN VLQQVARRIE AISDRIEKSN VTATTAILAS
LVLDKMVIKR LLRDDIMKES AIYQEIQAIG EAKGRQQGET KLVLRLLNRR IGEITQNLEE
NIRELSVEQL ENLGEALLDF NSQSDLINWL NSENK