Gene Cyan8802_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1467 
Symbol 
ID8390779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1504006 
End bp1505451 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content39% 
IMG OID644979468 
ProductDeoxyribodipyrimidine photo-lyase 
Protein accessionYP_003137218 
Protein GI257059330 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID[TIGR03556] deoxyribodipyrimidine photo-lyase, 8-HDF type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT TAATTCTATT TTGGCATCGT AAAGATTTAC GGATTTCCGA TAATGTTGGA 
CTGGCAAAAG CTCGCCAAGA ATCATCGAAA GTTGTGGGTA TTTTTTGTTT TGATTCTAAT
ATTTTAGAAC GGGATGATAT TGCGCCAGCG AGGATAGCTT ATCTCCTTGG TTGTTTACAA
GAATTACAAC AAACTTATCA AAAATTAGGC AGCAATTTAT TATTTATTCA AGGAGAACCC
AGTCACATTA TTCCCCAGTT AGCCGCCGTT CTTGATGCAG AAGCTGTCTT CTGGAATCTC
GATGTTGAAC CTTATTCCCA AAGGCGCGAT GAACAAGTTA TACAAGCTTT AAAAGAACAA
GGGATCAAAA CCCAAACTTA CTGGGATCAA TTATTACATT ATCCTGGAGA AATTGTGACC
AAATCGGGTG AACCTTATAA GGTTTATACG CCATTTTGGA AAAATTGGGA ACTGCAATCT
AAAGATTCTA TTACCAATAA TTTAGAAAAT CTAGAAGGAT TAACTCAAAC AGAACTAGAA
CAGGCTAAAA CCGTCAAAAT TATTGACTTA CCCACAGTCA AAGAATTAGG GTATCGTTGG
GATTATCCTT TGATTTTATC CCCAGGAGAA ACAGCAGCAG CCGAAAGACT TGATTACTTT
TGTGATGCAG CGATTAATGA GTATCAAGAA CAACGCAATT TCCCCGCTAT TGAGGGAACC
TCTCAATTGA GTCCTGCCTT AAAATTTGGG GTCATTGGTA TTCGTACAGT TTGGCAAGCA
ACCCTGAAAG CGATGGAAAA TAGTCGCAGT GATGAGGTCA GAGAAAGTAT TGTAACTTGG
CAAAAAGAAT TAGCTTGGCG AGAATTTTAT CAACATTGTT TATACTTTTT TCCTGAATTA
GCCGAAGGTC CCTATCGAGA GGACTTTCAA GACTTTCCTT GGGACAATAA TGAGGTATTA
TTTCAAGCTT GGTGTGACGG AAAAACCGGA TATCCTATTG TTGATGCTGC CATGAGACAG
TTAAATGAAA CCGGATGGAT GCACAACCGT TGTCGCATGA TTGTAGCAAG TTTTCTGACC
AAAGATTTAA TGATTAATTG GCAATGGGGA GAAAAATATT TTATGCAAAC CTTAATTGAT
GGAGACTTAG CGGCTAATAA TGGGGGATGG CAATGGAGTG CATCGAGTGG AATGGACCCC
AAACCTTTAC GCATTTTTAA CCCGGCTAGT CAAGCGCAAA AATTCGATCC TGATGCTGAT
TATATCCGTC AATGGCTACC TGAATTAAGG TCCCTTGATA CCGAAGTCTT AGTCACGGGA
AAAATCTCTC CCCTCGACTG TCTCAGTTGT GGTTATCCTC AACCCATCGT TAATCATAAT
CAGCAACAAC GGGAGTTTAA AAGACGATAC AGTCAAGTTA AACAGACAAA ATCAGTAAAC
ACTTAA
 
Protein sequence
MSKLILFWHR KDLRISDNVG LAKARQESSK VVGIFCFDSN ILERDDIAPA RIAYLLGCLQ 
ELQQTYQKLG SNLLFIQGEP SHIIPQLAAV LDAEAVFWNL DVEPYSQRRD EQVIQALKEQ
GIKTQTYWDQ LLHYPGEIVT KSGEPYKVYT PFWKNWELQS KDSITNNLEN LEGLTQTELE
QAKTVKIIDL PTVKELGYRW DYPLILSPGE TAAAERLDYF CDAAINEYQE QRNFPAIEGT
SQLSPALKFG VIGIRTVWQA TLKAMENSRS DEVRESIVTW QKELAWREFY QHCLYFFPEL
AEGPYREDFQ DFPWDNNEVL FQAWCDGKTG YPIVDAAMRQ LNETGWMHNR CRMIVASFLT
KDLMINWQWG EKYFMQTLID GDLAANNGGW QWSASSGMDP KPLRIFNPAS QAQKFDPDAD
YIRQWLPELR SLDTEVLVTG KISPLDCLSC GYPQPIVNHN QQQREFKRRY SQVKQTKSVN
T