Gene Cyan8802_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1394 
Symbol 
ID8390706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1425931 
End bp1427136 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content42% 
IMG OID644979397 
Productcoenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein 
Protein accessionYP_003137147 
Protein GI257059259 
COG category[C] Energy production and conversion 
COG ID[COG1035] Coenzyme F420-reducing hydrogenase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCTA TGACATCCAT TGCTCCCCAT ACTAAAGCCA AAGGCCTTAA ACCCGGTAGT 
CGTCGTCCCG CGAAGGAACT CTGTAGTGAG TGTGGTCTAT GCGATACCTA CTACATTCAC
TATGTTAAAG AAGCTTGTGC TTTTCTCAAT CAACAGATTA GCGAACTAGA AGAGATAGCC
CATGGCCGCA GTCGCAATTT AGACGATGAA AATGACTGGT ATTTTGGGGT TTATCAACAG
ATGACAGCCG CCAGGAAAAA ACAACCTATT GAAGGGGCAC AATGGACGGG GATTGTTAGT
GCGATCGCCT GTGAAATGTT AACCCAAGGA CTGGTAGAAG GGGTCGTCTG TGTCCAGAAT
ACCCCAGAAG ATCGCTTTCA ACCCATGCCG ATCATTGCCA AGACAACCGA GGAAATTTTA
GCCGCTAGGG TCAATAAACC GACGCTATCC CCTAATCTTT CGATTCTTGA ACAGGTAGAA
CAGTCAGGGA TGAAACGGTT ATTAGTGATT GGGGTTGGCT GTCAAATTCA AGCGTTACGC
GCAGTGGAGA AAAAATTAGG CTTAGAGAAG CTTTATATCT TAGGAACTCC CTGTGTGGAT
AATGTGACTC GTGAAGGGTT ACAAACCTTT CTACAAACGA CGAGTAAGTC TCCTGAGACG
GTGATTCATT ACGAGTTTAT GCAGGATTTT CGAGTGCATT TTAAACACGA AGATGGATCA
ATTGAAAAAG TCCCTTTCTT TGGCTTAAAA ACCAATAAAC TCAAGGATGT TTTTGCCCCT
TCTTGTATGA GTTGTTTTGA TTATGTTAAC TCTTTAGCTG ATCTCGTGGT GGGCTATATG
GGGGCTGAAT TTGGCTGGCA ATGGATTATG GTTCGTAATG AAACAGGACG AGAAATGTTA
GCGTTAGTTG AAGAACAAAT TGACACTAAA CCGGTTATTT CTCAAGGGGA TAGAAAACAA
GCGGTACAAC AAAGTATTCC GGCCTATGAT AAAGGAGTGA CTTTGCCGAT GTGGGCAGCA
AAATTAATGG GGGTTGTGAT AGAAAAAATT GGTCCGAAAG GATTAGAATA TGCACGGTTT
TCTATTGATT CTCATTTTAC TCGGAATTAT CTTTATCTTA AGCGGAATCA TCCTGAAAAA
TTAGCCGATC ATGTTCCTGA ATATGCCAAG CGAATTGTTA ATCAATATCA ATTACCCACG
CATTAA
 
Protein sequence
MPSMTSIAPH TKAKGLKPGS RRPAKELCSE CGLCDTYYIH YVKEACAFLN QQISELEEIA 
HGRSRNLDDE NDWYFGVYQQ MTAARKKQPI EGAQWTGIVS AIACEMLTQG LVEGVVCVQN
TPEDRFQPMP IIAKTTEEIL AARVNKPTLS PNLSILEQVE QSGMKRLLVI GVGCQIQALR
AVEKKLGLEK LYILGTPCVD NVTREGLQTF LQTTSKSPET VIHYEFMQDF RVHFKHEDGS
IEKVPFFGLK TNKLKDVFAP SCMSCFDYVN SLADLVVGYM GAEFGWQWIM VRNETGREML
ALVEEQIDTK PVISQGDRKQ AVQQSIPAYD KGVTLPMWAA KLMGVVIEKI GPKGLEYARF
SIDSHFTRNY LYLKRNHPEK LADHVPEYAK RIVNQYQLPT H