Gene Cyan8802_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1354 
Symbol 
ID8390666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1377861 
End bp1379114 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content44% 
IMG OID644979361 
ProductRibonuclease HI-like protein 
Protein accessionYP_003137111 
Protein GI257059223 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.384272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000713582 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTAACG ATCAGAACAG CCAGTTAATT ATTGCCAAAA ATACCCCTAT CATGTTTTTT 
GATGGGGAGT CTCAGGGAAA ATCAGAAGAA GGAGCAGCCG CAGCAGTTTT GTTGATATCT
GACGGGAGAA AATACGCTGT TAGTCAGTTA GTTTCCTGCG AGAGTGACGA CGAAGCCGAA
TATATGGGGC TGATTATTGG ACTCAAAAAA GCCCAAAAGC TTGGTATGAC AAGCCTAAAA
ATCAAAGGAG ACAGTGAAGT CGTCTTTAAT CAAGTGAATG GCTTAAAACC CGTCAGAGAA
GATAGGTTAA TTAGACTTTA CCGCAAAGTG ATTAAATTGA TGCAGGGGTT TGAACGCATC
TCCCTCGAAT GGATCACTCC AGAAAATAAC CGCATGGCTA GATCAGTCGT TCAACGGTGT
ATTCAAGACG CTTTAAACAA ACCAAGTTCC TCTACTAACA CGGCTCAGGC AATCACGAAG
CTAATTGAAA AAGGCGTAAA CTGCCAAGAT CAAGATTATC ATCAATTAAC AGCAAGCCCC
GATCAATGGA CTCATCAATC CCTATCACAA TTGAGAGAGA ACATTCCCCT AGAAGTCCGC
GATGCGATCG CCCTTCAGTG GCAAGGGGGA GAAGAAAACC TAGCTCAGAT GTATCGTTGG
TACTTACGGG GGCTCCCGCC AGAAATGGCC AGTCGGAAGG TTAACTTAGA ATACAAGACG
AACCCCTCCA TTGTTGAAAA ACTCCCTTGG GAAGAGGCGT TGATAGTGTC TCCTAGCTCC
CAAACCCCCG TTCCGGAGAC AGAAGATCTG CTTGTTTCCT TAGTCTCCAA TATTGATATT
GACTTTGATC CCCTAGAACA TTTTTTGAGC CATAGCATCA TCTTAGAACC CACAGAGTCC
TTTCCTGAGC AGGATACCCG TCTACAAACT TCCCCCGATC CCTTAGAAAT CTTGATCCTT
GAGAAACCCC CCGAAACGAA CCAAAGCATT GAGTTAATTG ACTTTGCTGA GATCAATCTT
GATGAAATGC AACCCCTAGA AGAACTGCTC GGTGAATCAC TGTTATCACA CGAGACTGAT
TTGAGCAAAG ATACGCTACC ATCAAAGTCA ACCATCACCG AGATTATTGA GATGATTCAT
CACTTATCTA TGGTAGAAAA ACAGGCTTTA GCTGAAGAAT TAGTCACTTT TCCCGAACTA
ATCAACCTGA TCCTCAAAGC GATCGCTGAT AAAGTCTCCC AAGGAAAACC CTGA
 
Protein sequence
MSNDQNSQLI IAKNTPIMFF DGESQGKSEE GAAAAVLLIS DGRKYAVSQL VSCESDDEAE 
YMGLIIGLKK AQKLGMTSLK IKGDSEVVFN QVNGLKPVRE DRLIRLYRKV IKLMQGFERI
SLEWITPENN RMARSVVQRC IQDALNKPSS STNTAQAITK LIEKGVNCQD QDYHQLTASP
DQWTHQSLSQ LRENIPLEVR DAIALQWQGG EENLAQMYRW YLRGLPPEMA SRKVNLEYKT
NPSIVEKLPW EEALIVSPSS QTPVPETEDL LVSLVSNIDI DFDPLEHFLS HSIILEPTES
FPEQDTRLQT SPDPLEILIL EKPPETNQSI ELIDFAEINL DEMQPLEELL GESLLSHETD
LSKDTLPSKS TITEIIEMIH HLSMVEKQAL AEELVTFPEL INLILKAIAD KVSQGKP