Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1315 |
Symbol | |
ID | 8390627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 1335087 |
End bp | 1337990 |
Gene Length | 2904 bp |
Protein Length | 967 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644979323 |
Product | DSH domain protein |
Protein accession | YP_003137073 |
Protein GI | 257059185 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4581] Superfamily II RNA helicase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATCAAC CCTTAGCCCA GTCTCAATTA AATTTAGCTA CTCTGTTTCC CTTTGAACTC GATGGATTCC AAAAAGACGC GATCGCAGCC CTAGCCAGAG GAAAATCCGT AGTCATCTGT GCCCCCACGG GGTCAGGAAA GACCGTCATT GGAGAATATG CCATTTATCA TGCCTTAGAA CAGGGTAAGC GTGTCTTCTA TACCACTCCC CTCAAAGCCC TTTCTAATCA AAAATTCCGC GACTTTCAGG ATAAATTTAG TCAAACAGAA GATAACAGCC TAGTCGGGTT AATCACAGGG GACACGGTAA TTAATGCCAA CGCTGCCATT GTGATTATGA CCACGGAAAT CTTCCGAAAT ATGCTCTACG AAACCCCCAT TGGTCAAGTG GGAACCTCCC TAGAAAACGT AGCCACGGTT ATCTTAGATG AATGTCATTA TATCAGCGAT CGCGGTCGGG GAACCGTTTG GGAAGAGTCG ATTATTTACT GTCCCCCCAA TATTCAATTA GTCGCCCTTT CTGCCACCAT CGGCAACCCC GAACAACTCA CCGACTGGAT TAACCAAGTT CGCTTAACTG CCCCTGGAGT TGACCCAAAA TCCGATGCTG TGAGTCTTTG TGAGTTAATT AATTCCGATT TTCGCCCCGT CCCGCTTCGT TTCTTTTTTA GTACCAAAAA AGGACTTGCC CCCCTACTCA ATCCCAAACA AACAGCCCTT AACCCTCGGC TTAAATTTAA AGGAAATCCT AACAAAAAAC GCCGACTCAA ACGGGAAGAC TGTCCGAGTT TATTAACGGT CATTAAACAA TTAGAAAAAC AAGATTTATT GCCCGCTATT TATGTGATTT TTAGCCGTCG CGGCTGCGAT CAATCAGTAC AACGACTTGA AGGGATCACC CTAGTCAACC CAGAAGAAGC CCATGCCCTA CAATACAATT TATTAACCTT TTTCTTAGCG GAAAATCCCC GGTTACAAGA AAGTCTGCTG GAGGCTGTAA AAACCGAAAA TCCTCCCTTA TATCAACCCC TTTTAGACTT TTTATCCAGT CCTATCCCTG ATGCTGATTT ATTTGATTAT TTAGCCAGAG ATCAAGAAAC AAAACTTCAT TTATTTCAAT TATTAGCCAC CACTTCCCAA TTAGTCAGAA GTGATCAATT AGAACCTCTC ACCAGAGGCA TTGCCGTCCA CCATGCAGGG ATTCTTCCCG TTTGGAAAGA ATTGGTCGAA CAACTCTTTG AAGCCGGATT AGTCAAAGTC GTCTTTGCCA CCGCTACCCT ATCGGCCGGC ATTAATATGC CAGCGCGGAC GACGGTTATT TCTGCCTTGT CTAAACGTAC CGATACCGGA CACGGGATGT TAACGCCCTC GGAGTTCCTA CAAATCGCTG GACGCGCTGG AAGACGAGGG ATGGATGAAG TGGGTTATGT GGTGACAGTT CAAACCCCCT TTGAAGGAGC CCAAGAAGCT GCTTTCTTAG CCACAGCCGG GTCAGAACCC TTAAAAAGCT GTTTTACCCC TTCCTACGGG ATGGTGTTGA ATTTATTACA AAAACATACT TTAAATGAGG CAAAACACTT ATTAGAGCGC AGTTTTGCCG AATATCTGGC AAAACTGAAG ATCGAACCTG AACAACAAGC GATCGCAGCC TTAACCACGG AACTGACCCA ACTCGATATG GCTTTAGCAG GACTCTCCGA AAGCGAACTG TTTGGCTATG AGAAACTAAA AGCCCGTCTT AAGGAGGAAC AGCGATTGCT GAAACTGCTT GAAGAACAGG CAGAAGAAAC GAGAAAACAG CAAATCTTCC CCCTATTAGC CAAGCTCAAC ACGGGAGATC TTTTGTATTT AAAGGGAAAA CACCTAAAAG TCGCTACCCC TCAATTAGCG GTTTTAGTGG GGATGGTTCC GGGTTCGGGT CAGGCTCCTG ATTTTCTGTG TTTAGGAGAA GATAATCGGT GGTATTTGGT CAAAAGAGCC GATATCGTTG AAATAAATTC GGCTTCGTTG CCGCGTGAGA GTCTTCAGTC CTTAAATTTG CCCGATCTCG AAGCGTGTCG TTTGGGTAAA GGTCCAAAAG GCGATGAAAC GTCAAGGCAA GTTTGTCAGC AAATGGGCGA TCGCGCTGTT TCTCTAAAAA TTGCCCCTGA AGTCATGGCA CAACAGCAGC GTTTAGACGA AATTCAACGA ACCCTAGAGC AGCATCCCCT AGAAAACCGC AAAAATCCAG CCCGATTATT GAAATTACAC CATCAACGGC TGAGATTGCG CGAACAACTC CATATTAGTC AGGTTCGGTT TCAAAAGCTT CAGTCAAGTC AATCCTATTA TTGGGAAGAA TTTCTCAATT TAATCGAAAT TTTACGGGAA TTTGAAGCTT TAGAGGGCTA TCATCCTACT CCCCTTGGCC AAGCTTGTGC AACGATTCGC GCCGAAAATG AACTCTGGTT AGGATTAGTA ATGATGTCGG GTGCTTTGGA ACGGTTAGAG TCTCCCCAAC TCGCGGCCGC GGTGAGTGCC TTAATTACCG AAAGTCTGCG GCCTGATACT TGGACAAATT ATCTCCCTTC CCCAGAAATT ATCGCGTTAT TTACGGAAAG TCATCCCCAA GGAGTGAGTT TACAAGAAAT TCGCCGTCTT CTCTATCAAA CTCAATCTCG CTATCATATC ACCATTCCCG TTTGGTTAGA ATTGGATTTG ATTGGTATGA TCGAGCAATG GGCTTTAGGG GCAGATTGGC AGGAATTATG CGAGAATACC AGTCTCGATG AAGGAGATGT CGTGCGGTTG TTAAGAAGAA CAATTGATCT CCTCTGGCAA ATTCCCCAAA TACCCGGAGT TTCTGATTAT TTAAAAGACA CTGCCAAAGA GGCAGTGACT CGGTTAAAAC GGTTTCCGCT TTAA
|
Protein sequence | MNQPLAQSQL NLATLFPFEL DGFQKDAIAA LARGKSVVIC APTGSGKTVI GEYAIYHALE QGKRVFYTTP LKALSNQKFR DFQDKFSQTE DNSLVGLITG DTVINANAAI VIMTTEIFRN MLYETPIGQV GTSLENVATV ILDECHYISD RGRGTVWEES IIYCPPNIQL VALSATIGNP EQLTDWINQV RLTAPGVDPK SDAVSLCELI NSDFRPVPLR FFFSTKKGLA PLLNPKQTAL NPRLKFKGNP NKKRRLKRED CPSLLTVIKQ LEKQDLLPAI YVIFSRRGCD QSVQRLEGIT LVNPEEAHAL QYNLLTFFLA ENPRLQESLL EAVKTENPPL YQPLLDFLSS PIPDADLFDY LARDQETKLH LFQLLATTSQ LVRSDQLEPL TRGIAVHHAG ILPVWKELVE QLFEAGLVKV VFATATLSAG INMPARTTVI SALSKRTDTG HGMLTPSEFL QIAGRAGRRG MDEVGYVVTV QTPFEGAQEA AFLATAGSEP LKSCFTPSYG MVLNLLQKHT LNEAKHLLER SFAEYLAKLK IEPEQQAIAA LTTELTQLDM ALAGLSESEL FGYEKLKARL KEEQRLLKLL EEQAEETRKQ QIFPLLAKLN TGDLLYLKGK HLKVATPQLA VLVGMVPGSG QAPDFLCLGE DNRWYLVKRA DIVEINSASL PRESLQSLNL PDLEACRLGK GPKGDETSRQ VCQQMGDRAV SLKIAPEVMA QQQRLDEIQR TLEQHPLENR KNPARLLKLH HQRLRLREQL HISQVRFQKL QSSQSYYWEE FLNLIEILRE FEALEGYHPT PLGQACATIR AENELWLGLV MMSGALERLE SPQLAAAVSA LITESLRPDT WTNYLPSPEI IALFTESHPQ GVSLQEIRRL LYQTQSRYHI TIPVWLELDL IGMIEQWALG ADWQELCENT SLDEGDVVRL LRRTIDLLWQ IPQIPGVSDY LKDTAKEAVT RLKRFPL
|
| |