| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1260 |
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| Symbol | |
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| ID | 8390572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | + |
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| Start bp | 1281018 |
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| End bp | 1282100 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644979268 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_003137018 |
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| Protein GI | 257059130 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.559672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00689196 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTCGC CAGACTTTGA CCAACAGATG ATGCAGCGAT GTCTGCAATT AGCCCGTCAA
GCATTAGGAC AAACTTCCCC TAATCCGTTA GTGGGGTCGG TAATTGTCCA AAATGGGGAG
ATCGTGGGTG AGGGGTTTCA TCCAAAAGCC GGAGAACCCC ATGCAGAAAT TTTTGCCCTC
AGACAAGCCC AAGAACGGGC AAAGGGAGCA ACGGTTTATG TTAGCCTAGA GCCCTGTAAT
CATTATGGCC GAACCCCTCC GTGTACGGAC GCTTTAATTG CTGCGGGGGT GAGTAAAGTG
GTGGTGGGAA TGGTAGATCC AAACCCCTTG GTATCGGGAA AAGGGGTTGA AAAGCTTCAA
GAAAGCGGAA TTGAAGTGGT TGTTGGCGTT GAAGAGTCCG CTTGTCGTCA GTTGAATGAG
GCGTTTATCC ATCGTATTTT GCACCATCAA CCCTTGGGTA TCTTAAAATA TGCCATGACC
CTTGATGGTA AAATTGCAGC GACTACTGGT CATAGTGCTT GGATAACGGG CACAGCTTCG
CGTCAGCTCG TCCATCAGGT TAGGGCAGCC TGTGATGCGG TGATCGTCGG AGGAAATACC
CTCAGAAAGG ACAATCCCAA TCTGACCACC CACGAAGTAG CAGGGGTTAA TCCCTTGCGG
GTGGTGATGA GTAAAACTCT GGATTTGCCT TCTGAGGCTA ACCTTTGGCA AACCGATATA
GCTCCTACAC TGGTTATAAC AGAAAGGGGT CGTAATAGTA AGTTACAAGC CCAATTGCGC
GATCGGGGGG TTGAGGTAAT CGAGTTAGCG TCGGTGACTC CTTCTGGGGT GATGCAACTG
CTTTATGAGA GGGGGTTATC GAGTGTGTTA TGGGAATGTG GAGGAACCTT AGCAGCACAA
GCGATCGCCG ATGGTGTGAT ACAAAAGATT ATGGCTTTTA TTGCGCCTAA AATTATTGGG
GGTACTATAG CACCTTGTCC TATTGGTGAT TTAGGATTAG AGAAAATGAC TCAAGCTTTA
GCATTACAAC GGGTTACTTT ACAACAAATT GATGGCGATA TTCTCATTGA AGGATATTTA
TAA
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| Protein sequence | MNSPDFDQQM MQRCLQLARQ ALGQTSPNPL VGSVIVQNGE IVGEGFHPKA GEPHAEIFAL
RQAQERAKGA TVYVSLEPCN HYGRTPPCTD ALIAAGVSKV VVGMVDPNPL VSGKGVEKLQ
ESGIEVVVGV EESACRQLNE AFIHRILHHQ PLGILKYAMT LDGKIAATTG HSAWITGTAS
RQLVHQVRAA CDAVIVGGNT LRKDNPNLTT HEVAGVNPLR VVMSKTLDLP SEANLWQTDI
APTLVITERG RNSKLQAQLR DRGVEVIELA SVTPSGVMQL LYERGLSSVL WECGGTLAAQ
AIADGVIQKI MAFIAPKIIG GTIAPCPIGD LGLEKMTQAL ALQRVTLQQI DGDILIEGYL
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