Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1147 |
Symbol | |
ID | 8390458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 1174532 |
End bp | 1175164 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644979160 |
Product | 3'-5' exonuclease |
Protein accession | YP_003136911 |
Protein GI | 257059023 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.546163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCAAT TAGAGAATTT TCAAGTCTGC GATCGCGATC TATCTGATCA AACCTTATCT CGTTATTTAG CAGCGACTGC TATCGCGGTA GATACAGAAA CCATGGGGTT AATTCCTCAA CGCGATCGCC TTTGTTTAGT TCAATTATGC GATCCTAGTG GATTTGTTAC CGCTATTCGC ATCGAACGAG GACAAAAAGA AGCCCCCAAG TTAAAACAAC TAATGGAAGC TAAAACTATT CTAAAAGTTT TCCATTATGC GCGGTTTGAT GTGGCTCAAT TGCGTTATCA TTTTGGCATT GAAACCCAAC CGATTTTTTG TACAAAAATT GCTAGTAAAT TAGCGCGTAC CTATACCAGT TCCCACGGAC TAAAAAGTTT AGTACAGGAA TTAGAAGGGA TTGAATTAGA TAAAACTTCC CAAAGTTCAG ACTGGGGAAA TTCGGCTAAT TTATCCGTAG CACAATTAAG TTATGCAGCC AATGATGTTC GGTATTTAAT CCCTGCAAAA GAGAAATTAA TCACGATGTT ACAACGGGAA GAAAGATGGC AATTAGCTGA GCAATGTTTT AATTGTATTC CGGTTTTTGT TTCTTTAGAT CTTGAACAAT ACAAAGATAT TTTTGAACAT TAA
|
Protein sequence | MTQLENFQVC DRDLSDQTLS RYLAATAIAV DTETMGLIPQ RDRLCLVQLC DPSGFVTAIR IERGQKEAPK LKQLMEAKTI LKVFHYARFD VAQLRYHFGI ETQPIFCTKI ASKLARTYTS SHGLKSLVQE LEGIELDKTS QSSDWGNSAN LSVAQLSYAA NDVRYLIPAK EKLITMLQRE ERWQLAEQCF NCIPVFVSLD LEQYKDIFEH
|
| |