Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1124 |
Symbol | |
ID | 8390435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 1153228 |
End bp | 1155024 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644979139 |
Product | signal peptide peptidase SppA, 67K type |
Protein accession | YP_003136890 |
Protein GI | 257059002 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type [TIGR00706] signal peptide peptidase SppA, 36K type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.712372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTTTA AACAAACCCT AGCTAGTTTA ATCGGAACCC TTGCTGGATT ATTTCTCTTT ATGACAATAG GAGTCAGTGG GTTAGTGATT TTGCTAATTT CTTTGGCTTC CTTGAATACG AGTCCAACCA TTAAGGATAA ATCCGTTTTA GTCTTTGATC TTTCCACCCA AGTCCAAGAT ACGGAACCTC CCCTCACCCT TTCGGATGTC TTCTCCGATG AAGATCAAAG TGTCCTGACT TTACGTCAAG TCCTCCAGGG AATTGAAAAA GCCACCAAAG ACGATCGCAT TCAAGCAATC TTTCTCGATG GGAGTACGGC CAGTGGAGGC AGTGGGTATG GGACTTTTAG TGAAATTCGG GAAGCGTTAG CTCAATTTCG AGAAGCTGGT AAGAAAATTA TTGTCTATGA TGTTACCTTA AGCGAACAAG AATATTATCT GAGTGCTCTA GCGGATACCG TCATTCTTAA CCCGATGGGA CAGATGGAAC TTAAAGGGTT GGCAATAGAA CCGTTATTTT GGTCAGGAAC CTTTGATAAA TACGGAATTG GGGTGCAAAC GGTACGAGTT GGTAGTTTTA AGGGGGCAAT AGAACCCTTT ACCCGTAAGG ATCTCAGTCC GGAAAACCGT CAGCAGTTAC AGGCACTCCT CGATGACCTT TGGAGCAACT TTTTAGTGAC GGTTGGGAAA AATCGGGAGG TTTCTCCGCA AATTTTGCAA CGATTAGCCA ATAATCAAGG CATTTTGACA GCGCAACAAG CTTTAGAAGT TGGTTTAGTC GATGAAGTGG GGTATCAAGA TCAGGCGATC GCTAAGTTAA AAGAACTCAC CGGAACGACT AATAGTACGG AGAAATCTTT CCCTCAAGTG ACCCTAGGGA CTTATCTCAA TGTCCCTGTT CTACAAGTAC CTGAACGATC TTCAAGCCAA AAAATTGCCG TGGTTTATCT TGAAGGGGCG ATCGTTGATG GACTGGGAAC CCTACAACAA GTCGGAGGCT CTCGTTTTGC CAATCTTTTG CGACAAATTC GCCAAGATGA GACGATTAAA GCGGTGGTTA TTCGGATTAA TAGTCCGGGG GGAAGTGCCA CCGCGTCTGA TATTATTCTC CGAGAAATTC AATTAACTCA AGCTGAAAAA CCCGTGATTA TTTCCATGGG AAATGTGGCC GCGTCTGGGG GATATTGGGT TGCCACAGGA GGACAACATA TTTTTGCTCA AGCTAACACC GTTACCGGAT CAATTGGAGT CTTTGGTTTA TTCTTGAATA TTAATGAAAT TGCTAACAAT AATGGGCTGA GTTGGGATAC GGTAAAAACC GCTAATTTTG GTGATTTAGG GACGGCAACT CGACCGAAAA CCCCTCAAGA ATTGGCGATT TATCAAGGTT TTGTCAATCA AGTTTATGAC CTATTTCTTG AAAGAGTAGC GAAATCTCGT CAGTTATCTA AAACAAAAGT TAATGAGATT GCTCAAGGAC GAATTTGGTC GGGAGAAGAT GCCAAAACTA TCGGATTAGT GGATAGTATT GGGGGGTTAA ATGCAGCGAT TAATTATGCG GCTCAACAGG CTAAATTAGG AACAGATTGG CAACTTGATG AATATCCTCA AAGACGTGGA TTAGAGTCTT TATTTATCAG GAACAACTGG GATAGTAACG AAAATCTAGG ACAGACTTCT ACTGATCCAC TCACCAAGGA ACTGATAAAA TTTAAAGATG AATTAACTAC CCTTCGTAGT CTTAATGATC CAAAAGGGGT TTATTCTCGT CTTCCGTTTA ATTGGCCATT TCATTAG
|
Protein sequence | MFFKQTLASL IGTLAGLFLF MTIGVSGLVI LLISLASLNT SPTIKDKSVL VFDLSTQVQD TEPPLTLSDV FSDEDQSVLT LRQVLQGIEK ATKDDRIQAI FLDGSTASGG SGYGTFSEIR EALAQFREAG KKIIVYDVTL SEQEYYLSAL ADTVILNPMG QMELKGLAIE PLFWSGTFDK YGIGVQTVRV GSFKGAIEPF TRKDLSPENR QQLQALLDDL WSNFLVTVGK NREVSPQILQ RLANNQGILT AQQALEVGLV DEVGYQDQAI AKLKELTGTT NSTEKSFPQV TLGTYLNVPV LQVPERSSSQ KIAVVYLEGA IVDGLGTLQQ VGGSRFANLL RQIRQDETIK AVVIRINSPG GSATASDIIL REIQLTQAEK PVIISMGNVA ASGGYWVATG GQHIFAQANT VTGSIGVFGL FLNINEIANN NGLSWDTVKT ANFGDLGTAT RPKTPQELAI YQGFVNQVYD LFLERVAKSR QLSKTKVNEI AQGRIWSGED AKTIGLVDSI GGLNAAINYA AQQAKLGTDW QLDEYPQRRG LESLFIRNNW DSNENLGQTS TDPLTKELIK FKDELTTLRS LNDPKGVYSR LPFNWPFH
|
| |