Gene Cyan8802_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1124 
Symbol 
ID8390435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1153228 
End bp1155024 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content42% 
IMG OID644979139 
Productsignal peptide peptidase SppA, 67K type 
Protein accessionYP_003136890 
Protein GI257059002 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.712372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTTA AACAAACCCT AGCTAGTTTA ATCGGAACCC TTGCTGGATT ATTTCTCTTT 
ATGACAATAG GAGTCAGTGG GTTAGTGATT TTGCTAATTT CTTTGGCTTC CTTGAATACG
AGTCCAACCA TTAAGGATAA ATCCGTTTTA GTCTTTGATC TTTCCACCCA AGTCCAAGAT
ACGGAACCTC CCCTCACCCT TTCGGATGTC TTCTCCGATG AAGATCAAAG TGTCCTGACT
TTACGTCAAG TCCTCCAGGG AATTGAAAAA GCCACCAAAG ACGATCGCAT TCAAGCAATC
TTTCTCGATG GGAGTACGGC CAGTGGAGGC AGTGGGTATG GGACTTTTAG TGAAATTCGG
GAAGCGTTAG CTCAATTTCG AGAAGCTGGT AAGAAAATTA TTGTCTATGA TGTTACCTTA
AGCGAACAAG AATATTATCT GAGTGCTCTA GCGGATACCG TCATTCTTAA CCCGATGGGA
CAGATGGAAC TTAAAGGGTT GGCAATAGAA CCGTTATTTT GGTCAGGAAC CTTTGATAAA
TACGGAATTG GGGTGCAAAC GGTACGAGTT GGTAGTTTTA AGGGGGCAAT AGAACCCTTT
ACCCGTAAGG ATCTCAGTCC GGAAAACCGT CAGCAGTTAC AGGCACTCCT CGATGACCTT
TGGAGCAACT TTTTAGTGAC GGTTGGGAAA AATCGGGAGG TTTCTCCGCA AATTTTGCAA
CGATTAGCCA ATAATCAAGG CATTTTGACA GCGCAACAAG CTTTAGAAGT TGGTTTAGTC
GATGAAGTGG GGTATCAAGA TCAGGCGATC GCTAAGTTAA AAGAACTCAC CGGAACGACT
AATAGTACGG AGAAATCTTT CCCTCAAGTG ACCCTAGGGA CTTATCTCAA TGTCCCTGTT
CTACAAGTAC CTGAACGATC TTCAAGCCAA AAAATTGCCG TGGTTTATCT TGAAGGGGCG
ATCGTTGATG GACTGGGAAC CCTACAACAA GTCGGAGGCT CTCGTTTTGC CAATCTTTTG
CGACAAATTC GCCAAGATGA GACGATTAAA GCGGTGGTTA TTCGGATTAA TAGTCCGGGG
GGAAGTGCCA CCGCGTCTGA TATTATTCTC CGAGAAATTC AATTAACTCA AGCTGAAAAA
CCCGTGATTA TTTCCATGGG AAATGTGGCC GCGTCTGGGG GATATTGGGT TGCCACAGGA
GGACAACATA TTTTTGCTCA AGCTAACACC GTTACCGGAT CAATTGGAGT CTTTGGTTTA
TTCTTGAATA TTAATGAAAT TGCTAACAAT AATGGGCTGA GTTGGGATAC GGTAAAAACC
GCTAATTTTG GTGATTTAGG GACGGCAACT CGACCGAAAA CCCCTCAAGA ATTGGCGATT
TATCAAGGTT TTGTCAATCA AGTTTATGAC CTATTTCTTG AAAGAGTAGC GAAATCTCGT
CAGTTATCTA AAACAAAAGT TAATGAGATT GCTCAAGGAC GAATTTGGTC GGGAGAAGAT
GCCAAAACTA TCGGATTAGT GGATAGTATT GGGGGGTTAA ATGCAGCGAT TAATTATGCG
GCTCAACAGG CTAAATTAGG AACAGATTGG CAACTTGATG AATATCCTCA AAGACGTGGA
TTAGAGTCTT TATTTATCAG GAACAACTGG GATAGTAACG AAAATCTAGG ACAGACTTCT
ACTGATCCAC TCACCAAGGA ACTGATAAAA TTTAAAGATG AATTAACTAC CCTTCGTAGT
CTTAATGATC CAAAAGGGGT TTATTCTCGT CTTCCGTTTA ATTGGCCATT TCATTAG
 
Protein sequence
MFFKQTLASL IGTLAGLFLF MTIGVSGLVI LLISLASLNT SPTIKDKSVL VFDLSTQVQD 
TEPPLTLSDV FSDEDQSVLT LRQVLQGIEK ATKDDRIQAI FLDGSTASGG SGYGTFSEIR
EALAQFREAG KKIIVYDVTL SEQEYYLSAL ADTVILNPMG QMELKGLAIE PLFWSGTFDK
YGIGVQTVRV GSFKGAIEPF TRKDLSPENR QQLQALLDDL WSNFLVTVGK NREVSPQILQ
RLANNQGILT AQQALEVGLV DEVGYQDQAI AKLKELTGTT NSTEKSFPQV TLGTYLNVPV
LQVPERSSSQ KIAVVYLEGA IVDGLGTLQQ VGGSRFANLL RQIRQDETIK AVVIRINSPG
GSATASDIIL REIQLTQAEK PVIISMGNVA ASGGYWVATG GQHIFAQANT VTGSIGVFGL
FLNINEIANN NGLSWDTVKT ANFGDLGTAT RPKTPQELAI YQGFVNQVYD LFLERVAKSR
QLSKTKVNEI AQGRIWSGED AKTIGLVDSI GGLNAAINYA AQQAKLGTDW QLDEYPQRRG
LESLFIRNNW DSNENLGQTS TDPLTKELIK FKDELTTLRS LNDPKGVYSR LPFNWPFH