Gene Cyan8802_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1093 
Symbol 
ID8390404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1117575 
End bp1119536 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content47% 
IMG OID644979109 
Productribonuclease, Rne/Rng family 
Protein accessionYP_003136860 
Protein GI257058972 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGC AAATTATTAT CGCGGAGCAA CACCATATTG CTGCTGTTTT CTGGGAAGAT 
CAAATTCAAG AATTGGTAGT AGCCACAGGC AACCAACAAG TCGGAGACAT TTATTTAGGA
TTAGTTGAAA ATGTCATCCC AGGCATTGAT GCAGCCTTTG TGAATATCGG AGATGCCGAA
CGCAATGGGT TTATTCATGT CACCGATTTA GGCCCTGTGA GGTTAAAAAA GAGTGCAGGA
GCTATTACGG AACTGCTGAC CCCCCAGCAA AAAGTCCTGG TTCAAGTGAT GAAAGAACCC
ACGGGGAACA AGGGACCTCG ACTAACGGGC AATATTACCC TACCTGGACG CTATTTAGTC
TTAATGCCCT ATGGTAAGGG GGTCAACCTC TCCAGACGCA TTAAAACCGA TGATGAACGC
AGTCGCTTAC GCGCTCTGGC TATTTTGATT AAACCCGCCG GAATGGGACT TCTGGTGCGT
ACGGAAGCCG AAGGCAAAGC CGAAGAAGCC ATCATGGAGG ATTTAGAGTT TCTTCAGCGA
CAATGGGAAT CTATCCAAGT TCAAGCCACT TCTACCCGTC CTCCGTCCCT GTTAAACCGA
GATGATGATT TTATTCAACG GGTCTTGCGG GATATGTACA GTGGAGATGT TAACCGTATT
GTGGTGGACT CTCCGGCCGG GGTTAAGCGA GTTAAACAGC AATTAATGAC CTGGAGTGGT
GGTCGTTCCC CAGAAGGAGT CCTCATTGAT CATCACCGCG AAACCCTACC TGTTTTAGAT
TATTTCCGCG TTAATGCAGC TATTCGAGAG GCTCTTAAAC CTAGGGTGGA TTTGCCCTCT
GGAGGGTACA TTATCATAGA ACCCACCGAA GCCCTAACGG TGATTGATGT GAACTCCGGG
TCCTTTACCC GTTCAGCAAC GGCACGGGAA ACGGTGCTGT GGACTAATAG CGAAGCAGCG
ACAGAAATTG CTCGTCAATT GCGTCTGCGA AATATTGGCG GGGTGATTAT TGTGGACTTC
ATTGATATGG ACTCGCGACG CGATCAATTG AAGTTGCTAG AACATTTTAA TAAAACCTTA
AGAGCCGATA AAGCCAGACC TCAAATTGCC CAACTTTCTG AACTGGGGTT GGTGGAACTG
ACCCGTAAGC GTCAGGGTAA AAATATTTAT GAGTTATTTG GTCAACCTTG TCCCAATTGT
GGCGGGTTAG GGCATCTGGT TCATCTGCCG GGTCAATCGG AATTAATTGC CTTAGAAACC
GTGACGGTTG CGCCACCGAT TCCTGTGGCT AAACCCATTG AGAAACCCAC AGAAGTGAGT
GAACCGTTTG GGGAATCGTT TTTTGAGGAG GACATGATTG ATATCCCTCG TCAATTGGAA
TTACTTCACC ACCCCAGTTA TCAAGAGCAA GGCAACATTC CTAATACCCG TCGTCGTCGT
CGTCGTCAAC CTCAACTCAA AGAGGAATCT ACCAGCAATC CCAAAGTGAT TCTGAGTACG
CCGACTAAGG AAGTAGATTA TTCAACAGAT ACGGAAGTAG AACCTCGAAA AGAACGAACT
CCAAGGCATT TGCGTCGAGA AGAAACTCCC ATCGAAAGGG TATCGGTGGA AATGACCCCC
CTCGAACAAG ATGTCTATGC TTTAATGGGA ATTTCTCCGT TAGTCCGTCT TGATCAGGAA
TTTAAAGAAC CGAAGTCTGT GGTAGTCTCT GTTAAGCTTC CTGAAGGTTC TGAGGATAAG
ATTTATGCGC CTAAATTAGA GACACCAACG GGAGCATCTG AATCTTTCTC TGTGACAGTG
GTTGAGCCCC CGAAAGAACT AGAATCAGAA CCAGAATTAG ACTCAGAACC CGACTTAGAA
ACCGACCTCG AAAACGACAC AATGATCAAA TCACACGAGA CTGACTCACA ACGTCCAGTC
ATTCGTCGTC GTCGTCGTCG TTCCTCGGCT AAGGAGAGTT GA
 
Protein sequence
MPKQIIIAEQ HHIAAVFWED QIQELVVATG NQQVGDIYLG LVENVIPGID AAFVNIGDAE 
RNGFIHVTDL GPVRLKKSAG AITELLTPQQ KVLVQVMKEP TGNKGPRLTG NITLPGRYLV
LMPYGKGVNL SRRIKTDDER SRLRALAILI KPAGMGLLVR TEAEGKAEEA IMEDLEFLQR
QWESIQVQAT STRPPSLLNR DDDFIQRVLR DMYSGDVNRI VVDSPAGVKR VKQQLMTWSG
GRSPEGVLID HHRETLPVLD YFRVNAAIRE ALKPRVDLPS GGYIIIEPTE ALTVIDVNSG
SFTRSATARE TVLWTNSEAA TEIARQLRLR NIGGVIIVDF IDMDSRRDQL KLLEHFNKTL
RADKARPQIA QLSELGLVEL TRKRQGKNIY ELFGQPCPNC GGLGHLVHLP GQSELIALET
VTVAPPIPVA KPIEKPTEVS EPFGESFFEE DMIDIPRQLE LLHHPSYQEQ GNIPNTRRRR
RRQPQLKEES TSNPKVILST PTKEVDYSTD TEVEPRKERT PRHLRREETP IERVSVEMTP
LEQDVYALMG ISPLVRLDQE FKEPKSVVVS VKLPEGSEDK IYAPKLETPT GASESFSVTV
VEPPKELESE PELDSEPDLE TDLENDTMIK SHETDSQRPV IRRRRRRSSA KES