Gene Cyan8802_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1079 
Symbol 
ID8390388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1106512 
End bp1106808 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content50% 
IMG OID644979093 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_003136846 
Protein GI257058958 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000508915 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCT ATGTTGGCAA TCTCGCCTAT GAGATTACCG AAGAAGACCT AACCCAGGTC 
TTTGCTGAGT ATGGAACCGT CAAACGAGTT CACCTTCCCG TTGACCGAGA AACCCAGAAA
ATGCGAGGAT TTGGCTTCGT TGAAATGGCG AGTGACGACC AAGAAGACGC TGCGATCGCT
CAGCTTGATG GGGCCGAATG GATGGGTCGC CAGCTTAAGG TGAACAAAGC TAGACCCCGT
GAAAATAACA ACAAGGGCTC CTTTGGTGGA GGAGGACGCA AGAACTATCG CTCGTAA
 
Protein sequence
MSIYVGNLAY EITEEDLTQV FAEYGTVKRV HLPVDRETQK MRGFGFVEMA SDDQEDAAIA 
QLDGAEWMGR QLKVNKARPR ENNNKGSFGG GGRKNYRS