Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1066 |
Symbol | |
ID | 8390375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 1092921 |
End bp | 1094267 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644979080 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_003136833 |
Protein GI | 257058945 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.200183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCTA TTACCATAAA ACCTGTTGAA AATCAACAAG ATTTAATCAT TGATAATTCC GATCAAAATG TTTCATTACA AGGAACCCTT AAAATTCCTG GCGATAAATC GATCTCCCAT CGATCGCTAA TGTTAGGGGC GATCGCACAA GGAGAAACCA TCATCGAGGG ACTCTTATTA GGGGAAGATC CCCGCAGTAC CGCCGCCTGT TTTCGCGCCA TGGGGGCAGA AATTTCGCCC CTCAATAGCC AAAGCATCAC CGTAAAAGGG GTGGGACTGG GAAACCTCCA AGAACCCCTA GATGTCCTCG ATGCGGGCAA TTCTGGAACC ACCATGCGGT TAATGTTGGG GTTACTTGCG TCCCATCCTG GCCGCTTTTT CTGCGTCACG GGGGACAATT CCCTGCGATC GCGTCCGATG TCCCGCGTCG TCAAACCCTT GCAAGAAATG GGGGCAAACA TTTGGGGTCG TCAGCAAAAT TCCCTTGCCC CCCTCGCCAT TCAAGGGCAA AACCTGACTC CTATCCATTA TCATTCCCCC ATTGCCTCAG CGCAAGTTAA GTCCTGTATC TTACTCGCGG GACTGATGAC AGAGGGCAAA ACGACGGTGA CAGAACCCAC TTTATCGCGG GATCACAGCG AACGGATGTT ACAAGGGTTT GGGGCTCAGT TGGAGATCGA TCCCGAAACC CATAGCGTCA CTATTACAGG AAAACCGACC TTAATTGGTC AAAAAGTGGT GGTTCCAGGG GATATTAGTT CCGCAGCCTT TTGGTTAGTG GCCGGGGCGA TCGTTCCAGG GTCAGAATTA TTAATAGAAA ATGTGGGAAT TAATCCAACA CGAACGGGAA TTTTAGAAGC TTTAGAAATG ATGGAAGCTG ATATTAAATT AGAAAATAAA CGGATTGTAA CAGGCGAACC TGTGGCGGAT ATACGGGTTA AATTTAGTCA ATTAAAAGCC TGTACGATTG GCGGTGATTT GATTCCTCGT TTAATCGATG AGATTCCTAT TTTAGCAGTA GCTGCGGTCT GTGCCCAAGG AACAACTATT ATTAAAGATG CAGCCGAATT ACGGGTTAAA GAAAGCGATC GCTTAGCGGT AATGGCTTCA GAATTAAGCC GCATGGGAGC AAAAATTACT GAGTTACCTG ATGGGTTAGA AATTACCGGA GGAACCCTGT TAAAAGGAGA GGAAGTTGAT AGTTATACCG ATCATCGCAT CGCTATGAGT TTAGCGATTG CTTCCCTTAT TGCTAAGGGT TCAACCACCA TTCATCGCGC GGAAGCTGCT GCGGTTTCCT ATCCTGAATT TGTTACCACT TTGCAACAGG TGATTCAAGT TAGTTGA
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Protein sequence | MTSITIKPVE NQQDLIIDNS DQNVSLQGTL KIPGDKSISH RSLMLGAIAQ GETIIEGLLL GEDPRSTAAC FRAMGAEISP LNSQSITVKG VGLGNLQEPL DVLDAGNSGT TMRLMLGLLA SHPGRFFCVT GDNSLRSRPM SRVVKPLQEM GANIWGRQQN SLAPLAIQGQ NLTPIHYHSP IASAQVKSCI LLAGLMTEGK TTVTEPTLSR DHSERMLQGF GAQLEIDPET HSVTITGKPT LIGQKVVVPG DISSAAFWLV AGAIVPGSEL LIENVGINPT RTGILEALEM MEADIKLENK RIVTGEPVAD IRVKFSQLKA CTIGGDLIPR LIDEIPILAV AAVCAQGTTI IKDAAELRVK ESDRLAVMAS ELSRMGAKIT ELPDGLEITG GTLLKGEEVD SYTDHRIAMS LAIASLIAKG STTIHRAEAA AVSYPEFVTT LQQVIQVS
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