Gene Cyan8802_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_0979 
Symbol 
ID8390288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1002426 
End bp1002989 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content33% 
IMG OID644978995 
ProductShikimate kinase 
Protein accessionYP_003136748 
Protein GI257058860 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0506883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC AAAAATTACT TCAAGGAATT AATATTTATC TTATTGGTAT GATGGGAAGC 
GGAAAAAGTA CCATTGGAAA AATCCTAGCA CAACGACTAG ACTATCGTTT TTTTGACACA
GATATTTTAA TTGAACGGGT GACACAACAA AGTATTAATG ATATTTTTGT TACCCAAGGA
GAAACCGTAT TTAGAGATAT AGAAACTCAA GTACTTTCAG AAGTAGCAGC TTGTACACGA
AGTGTGATTG CTACGGGCGG AGGAATTGTG TTAAACTCTC AAAATTGGAG CTATCTTCAT
CATGGTTTGA TCATTTGGTT AGATGTTTCT ATCAAATTAT TAAAAACCCG TTTAATCAAT
GATACTACCC GTCCTCTTCT CAAAGAAAGT GATCTAACCT TAAAGCTAAA AACCTTAGAT
GAACAACGGC GTAATCTTTA CAATAAAGCC GATTTAAGCA TTGTTATTAA TCAAAATAGA
ACCCCTGAAA GCATTGTTTC TGAGATACTA GAAGCGATTC CTACTGTTAT TAAACCTAAA
GTAGAAGCTA ATCAATTTAA TTAA
 
Protein sequence
MKTQKLLQGI NIYLIGMMGS GKSTIGKILA QRLDYRFFDT DILIERVTQQ SINDIFVTQG 
ETVFRDIETQ VLSEVAACTR SVIATGGGIV LNSQNWSYLH HGLIIWLDVS IKLLKTRLIN
DTTRPLLKES DLTLKLKTLD EQRRNLYNKA DLSIVINQNR TPESIVSEIL EAIPTVIKPK
VEANQFN