Gene Cyan8802_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_0912 
Symbol 
ID8390220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp929534 
End bp930901 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content38% 
IMG OID644978928 
ProductMATE efflux family protein 
Protein accessionYP_003136682 
Protein GI257058794 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCAA GAAATAGCGA TCGCTTTGGG TTTGATTTTA TCAAACTAAC CGTTACCAAT 
ATTCTCTCAA ATATCATGAT TCCTTTGGCG GGATTGGTCG ATCTCGCCTT TTTGGGACAT
CTAACAGATA TTCGTCATTT AGCTGGAGTT GCTTTGGCGA CAATTTTGTT TGATTATCTC
TATCGTACTT GTAAATTTTT ACGGATGACG ACAACAGGAA CAACCGCTCA AGCAGTCGGA
AGAGAGGAAC CAGATACCGT CTTATTAACC CTGTTACGCC ATGGGTTTTT AGCGTTAATC
GTAGCAGCAA TTATCCTTTT ATTACAGCAT CCTTTAAGAG AATTAGGGTT TACGATTTTG
ACGGCTGTTC CTGATGTTAA ACAGGCCGGT ACAGACTATT TTAATGCGCG TATTTGGGGG
GCACCGGCCG CTTTAATGAA TTTTGTCGTT ATCGGTTGGT TTTTGGGACG TAAACAGAGT
AATATCGTGT TAATTATGTC CTTAGTTGGC AATGGAGTGA ATATTCTTTT AGATTATTGG
TTTATTATGC GTTTAGGATG GAATAGTGTG GGTGCAGGGG CTGCTACAGC TATTAGTCAA
TATGGGATGT TACTGTTAGG AATTATTGTC ATACTCTGGG AAGGTTGGTT GCTTCAGTTG
CCAAAAGTTG CTCAAAAGAT TTTTCAATTA GATGCGATGA AATCGGCTTT GGGAATCAAT
TTTGATATTT GGATACGCAC CCTAGCCAGT GTTTCAACCT TTGCCATTTT TACTAACTTG
AGTAGTGCCT TTGGAACCCT CATTTTAGCG AGTAATAGTT TAATGATAGA AGTGATTAAT
TTAGCGGTTT TCTTGATAGA AGGCTCAGCC TTTGCTACGG AAACCTTTGC AGGAGCTTTT
TATGGAGAAG GTCGTCGAGA AAATCTGCCG TCTTTATTAG GATTTTCTGC TGCTCTTAGT
GTGAGTTTAG GAGGTGTTTT AGCCTTAATT TTTATCATTT TTCCAGAGCC CATGTTTGGA
CTATTAACTA ATCATCAGGA AGTGATTGAA CAAATCAACC AATATACCCT ATGGTTATTG
CCTATTCTCA TTATTCTGTC AGTCGTTTAT ATGTTAGAAG GCTATTTTTT AGGCTTAACC
CAAGTCTTGA TTATTCGTAA TAGTATGTTA ATGGCAGCCA TCATAGGCTT TTTACCTTTA
GCTATCTGCG CTTGGCAATT CAAAAATGTG CATTTATTAT GGACAGGATT GTTATTATTT
ATGGGGACGA GAGCGTTAAC ATTAGGTCTA TCAGTTCCTC AAAGCTTTAA TGAAGATGAA
TTGGCGAGTC TACCGAACCT CAACAAAACG ACTCAGAACA GTATATGA
 
Protein sequence
MFSRNSDRFG FDFIKLTVTN ILSNIMIPLA GLVDLAFLGH LTDIRHLAGV ALATILFDYL 
YRTCKFLRMT TTGTTAQAVG REEPDTVLLT LLRHGFLALI VAAIILLLQH PLRELGFTIL
TAVPDVKQAG TDYFNARIWG APAALMNFVV IGWFLGRKQS NIVLIMSLVG NGVNILLDYW
FIMRLGWNSV GAGAATAISQ YGMLLLGIIV ILWEGWLLQL PKVAQKIFQL DAMKSALGIN
FDIWIRTLAS VSTFAIFTNL SSAFGTLILA SNSLMIEVIN LAVFLIEGSA FATETFAGAF
YGEGRRENLP SLLGFSAALS VSLGGVLALI FIIFPEPMFG LLTNHQEVIE QINQYTLWLL
PILIILSVVY MLEGYFLGLT QVLIIRNSML MAAIIGFLPL AICAWQFKNV HLLWTGLLLF
MGTRALTLGL SVPQSFNEDE LASLPNLNKT TQNSI